Armcx7-ps Pseudogene Detail

Summary

• Symbol
  Armcx7-ps
• Name
  armadillo repeat containing, X-linked 7, pseudogene
• Synonyms
  Gm16397

• Feature Type
  pseudogene
• IDs
  MGI:3648067
  NCBI Gene: 100040933
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:133632320-133632813 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 56.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  18 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648067	pseudogene	ChrX:133632243-133633531 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014827	pseudogene	ChrX:131937661-131938091 (-)
A/J	MGP_AJ_G0014824	pseudogene	ChrX:131367385-131367808 (-)
AKR/J	MGP_AKRJ_G0014761	pseudogene	ChrX:135557610-135558103 (+)
BALB/cJ	MGP_BALBcJ_G0014777	pseudogene	ChrX:129804066-129804491 (-)
C3H/HeJ	MGP_C3HHeJ_G0014608	pseudogene	ChrX:132006895-132008929 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015263	pseudogene	ChrX:135808091-135810540 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0014601	pseudogene	ChrX:139896405-139898268 (+)
DBA/2J	MGP_DBA2J_G0014687	pseudogene	ChrX:130654589-130657308 (+)
FVB/NJ	MGP_FVBNJ_G0014667	pseudogene	ChrX:129977070-129980138 (+)
LP/J	MGP_LPJ_G0014782	pseudogene	ChrX:132827833-132828263 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014714	pseudogene	ChrX:147251695-147255949 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015241	pseudogene	ChrX:131359895-131363140 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0013821	pseudogene	ChrX:113526529-113528681 (+)
WSB/EiJ	MGP_WSBEiJ_G0014309	pseudogene	ChrX:129748348-129748778 (-)

Homology

• Human Ortholog
  ARMCX7P, armadillo repeat containing X-linked 7, pseudogene

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  ARMCX7P, armadillo repeat containing X-linked 7, pseudogene
  
• Synonyms
  ARMCX6-ps, GASP10ps
• Links
  HGNC:49917

  NCBI Gene ID: 653354

  
  
• Chr Location
  Xq22.1; chrX:101597480-101598268 (+)  GRCh38

---

• MGI Vertebrate Homology
  Armcx7-ps stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: ARMCX7P
• Gene Tree
  Armcx7-ps
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000081972 (Evidence)
• NCBI Gene
  100040933

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081972	Ensembl Gene Model | MGI Sequence Detail	494	C57BL/6J
transcript	ENSMUST00000122201	Ensembl | MGI Sequence Detail	494	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;