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Pate12 Gene Detail
Summary
  • Symbol
    Pate12
  • Name
    prostate and testis expressed 12
  • Synonyms
    Gm7257
  • Feature Type
    protein coding gene
  • IDs
    MGI:3647831
    NCBI Gene: 639025
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:36343180-36346234 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 20.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    58 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647831
 protein coding gene Chr9:36343125-36346234 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034548
 protein coding gene Chr9:34347774-34350824 (+)
A/J MGP_AJ_G0034527
 protein coding gene Chr9:33451357-33454410 (+)
AKR/J MGP_AKRJ_G0034454
 protein coding gene Chr9:34202372-34205425 (+)
BALB/cJ MGP_BALBcJ_G0034518
 protein coding gene Chr9:33318394-33321447 (+)
C3H/HeJ MGP_C3HHeJ_G0034231
 protein coding gene Chr9:34598005-34606147 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035040
 protein coding gene Chr9:35450235-35453289 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0033552
 protein coding gene Chr9:34332089-34335146 (+)
CBA/J MGP_CBAJ_G0034204
 protein coding gene Chr9:36680758-36683813 (+)
DBA/2J MGP_DBA2J_G0034362
 protein coding gene Chr9:33513321-33516374 (+)
FVB/NJ MGP_FVBNJ_G0034303
 protein coding gene Chr9:32768769-32771822 (+)
LP/J MGP_LPJ_G0034448
 protein coding gene Chr9:34641151-34644439 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034349
 protein coding gene Chr9:38344888-38347941 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035060
 protein coding gene Chr9:34148680-34151732 (+)
PWK/PhJ MGP_PWKPhJ_G0033258
 protein coding gene Chr9:33447080-33450144 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0033668
 protein coding gene Chr9:33949940-33953550 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000023093 Ensembl Gene Model | MGI Sequence Detail 3055 C57BL/6J ±  kb
transcript ENSMUST00000041537 Ensembl | MGI Sequence Detail 519 Not Applicable  
polypeptide ENSMUSP00000048154 Ensembl | MGI Sequence Detail 99 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 1
  • Earliest
    J:138601 Levitin F, et al., PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR proteins that are expressed in reproductive and neuron-rich tissues and possess neuromodulatory activity. J Biol Chem. 2008 Jun 13;283(24):16928-39
  • Latest
    J:279308 Fujihara Y, et al., Identification of multiple male reproductive tract-specific proteins that regulate sperm migration through the oviduct in mice. Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18498-18506
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory