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Ccdc188 Gene Detail
Summary
  • Symbol
    Ccdc188
  • Name
    coiled-coil domain containing 188
  • Synonyms
    Gm7873
  • Feature Type
    protein coding gene
  • IDs
    MGI:3647803
    NCBI Gene: 102638083
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:18217879-18220348 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 11.29 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647803
protein coding gene Chr16:18214227-18220348 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022603
protein coding gene Chr16:15425440-15426583 (+)
A/J MGP_AJ_G0022564
protein coding gene Chr16:14661966-14663109 (+)
AKR/J MGP_AKRJ_G0022541
protein coding gene Chr16:15239058-15240201 (+)
BALB/cJ MGP_BALBcJ_G0022569
protein coding gene Chr16:14810845-14811988 (+)
C3H/HeJ MGP_C3HHeJ_G0022336
protein coding gene Chr16:15402286-15403429 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023018
protein coding gene Chr16:15692299-15693442 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020538
protein coding gene Chr16:14712806-14713948 (+)
CAST/EiJ MGP_CASTEiJ_G0021863
protein coding gene Chr16:15290619-15291762 (+)
CBA/J MGP_CBAJ_G0022305
protein coding gene Chr16:16378745-16379888 (+)
DBA/2J MGP_DBA2J_G0022437
protein coding gene Chr16:14573144-14574287 (+)
FVB/NJ MGP_FVBNJ_G0022412
protein coding gene Chr16:14630523-14631666 (+)
LP/J MGP_LPJ_G0022504
protein coding gene Chr16:15209199-15210342 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022434
protein coding gene Chr16:16031812-16032955 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023029
protein coding gene Chr16:15173868-15175011 (+)
PWK/PhJ MGP_PWKPhJ_G0021605
protein coding gene Chr16:14843371-14844514 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021433
protein coding gene Chr16:15145010-15146146 (+)
WSB/EiJ MGP_WSBEiJ_G0021909
protein coding gene Chr16:15160368-15161511 (+)



Homology
more
  • Human Ortholog
    CCDC188, coiled-coil domain containing 188
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC188, coiled-coil domain containing 188
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 388849
    neXtProt AC: NX_H7C350
    UniProt: H7C350

  • Chr Location
    22q11.21; chr22:20148113-20151828 (-)  GRCh38.p7

Human Diseases
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  • References
    5 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    63 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090777 Ensembl Gene Model | MGI Sequence Detail 2470 C57BL/6J ±  kb
transcript ENSMUST00000231369 Ensembl | MGI Sequence Detail 1588 Not Applicable  
polypeptide ENSMUSP00000155981 Ensembl | MGI Sequence Detail 436 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    4 Sequences
  • InterPro Domains
    IPR026617 Transmembrane and coiled-coil domain-containing protein 2/5
Molecular
Reagents
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  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 70
    Developmental Gene Expression 1
    Diseases 5
    Phenotypes 63
  • Earliest
    J:57757 Lindsay EA, et al., Congenital heart disease in mice deficient for the DiGeorge syndrome region [see comments]. Nature. 1999 Sep 23;401(6751):379-83
  • Latest
    J:278079 Murano T, et al., Transcriptomic immaturity inducible by neural hyperexcitation is shared by multiple neuropsychiatric disorders. Commun Biol. 2019;2:32

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory