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Gm5258 Pseudogene Detail
Summary
  • Symbol
    Gm5258
  • Name
    predicted gene 5258
Location &
Maps
more
  • Sequence Map
    Chr1:86250989-86251315 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 43.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647794
 pseudogene Chr1:86250957-86253155 (+)
129S1/SvImJ MGP_129S1SvImJ_G0010229
 pseudogene Chr1:87574411-87574740 (+)
A/J MGP_AJ_G0010224
 pseudogene Chr1:84333157-84333486 (+)
AKR/J MGP_AKRJ_G0010195
 pseudogene Chr1:86790595-86790921 (+)
BALB/cJ MGP_BALBcJ_G0010199
 pseudogene Chr1:84446946-84447272 (+)
C3H/HeJ MGP_C3HHeJ_G0010137
 pseudogene Chr1:87029866-87030195 (+)
C57BL/6NJ MGP_C57BL6NJ_G0010458
 pseudogene Chr1:90906251-90906577 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0009188
 pseudogene Chr1:78827895-78828224 (+)
CAST/EiJ MGP_CASTEiJ_G0009964
 pseudogene Chr1:86268544-86268863 (+)
CBA/J MGP_CBAJ_G0010105
 pseudogene Chr1:93729037-93729363 (+)
DBA/2J MGP_DBA2J_G0010137
 pseudogene Chr1:83641380-83641706 (+)
FVB/NJ MGP_FVBNJ_G0010157
 pseudogene Chr1:82692872-82693201 (+)
LP/J MGP_LPJ_G0010218
 pseudogene Chr1:88676535-88676864 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0010117
 pseudogene Chr1:97007699-97008025 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0010434
 pseudogene Chr1:86909138-86909467 (+)
PWK/PhJ MGP_PWKPhJ_G0009868
 pseudogene Chr1:82926543-82926869 (+)
SPRET/EiJ MGP_SPRETEiJ_G0009685
 pseudogene Chr1:85867833-85868162 (+)
WSB/EiJ MGP_WSBEiJ_G0010028
 pseudogene Chr1:86553639-86553965 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5258
  • Find Mice (IMSR)
    2 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091806 Ensembl Gene Model | MGI Sequence Detail 327 C57BL/6J ±  kb
transcript ENSMUST00000165437 Ensembl | MGI Sequence Detail 327 Not Applicable  
polypeptide XP_036011224 RefSeq | MGI Sequence Detail 160 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory