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Bpifa6 Gene Detail
Summary
  • Symbol
    Bpifa6
  • Name
    BPI fold containing family A, member 6
  • Synonyms
    Gm5840
  • Feature Type
    protein coding gene
  • IDs
    MGI:3647736
    NCBI Gene: 545477
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:153974945-154000495 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 76.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    611 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647736
protein coding gene Chr2:153974945-154000495 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026704
protein coding gene Chr2:158685880-158711421 (+)
A/J MGP_AJ_G0026670
protein coding gene Chr2:152296827-152322850 (+)
AKR/J MGP_AKRJ_G0026641
protein coding gene Chr2:156780388-156805940 (+)
BALB/cJ MGP_BALBcJ_G0026680
protein coding gene Chr2:152636128-152661673 (+)
C3H/HeJ MGP_C3HHeJ_G0026422
protein coding gene Chr2:157151347-157176891 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027129
protein coding gene Chr2:163309475-163334957 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024499
protein coding gene Chr2:145870446-145895757 (+)
CAST/EiJ MGP_CASTEiJ_G0025883
protein coding gene Chr2:157420114-157442007 (+)
CBA/J MGP_CBAJ_G0026401
protein coding gene Chr2:169309668-169335335 (+)
DBA/2J MGP_DBA2J_G0026536
protein coding gene Chr2:151524069-151550046 (+)
FVB/NJ MGP_FVBNJ_G0026502
protein coding gene Chr2:149971402-149996948 (+)
LP/J MGP_LPJ_G0026641
protein coding gene Chr2:158802821-158828362 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026524
protein coding gene Chr2:173292261-173318309 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027184
protein coding gene Chr2:156665912-156691466 (+)
PWK/PhJ MGP_PWKPhJ_G0025617
protein coding gene Chr2:151057584-151083077 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025420
protein coding gene Chr2:155526391-155553045 (+)
WSB/EiJ MGP_WSBEiJ_G0025953
protein coding gene Chr2:157575713-157601372 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 545477 NCBI Gene Model | MGI Sequence Detail 25551 C57BL/6J ±  kb
transcript NM_001080811 RefSeq | MGI Sequence Detail 1605 C57BL/6  
polypeptide NP_001074280 RefSeq | MGI Sequence Detail 367 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017943 Bactericidal permeability-increasing protein, alpha/beta domain superfamily
    IPR017942 Lipid-binding serum glycoprotein, N-terminal
Molecular
Reagents
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  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Phenotypes 3
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
  • Latest
    J:174122 Bingle CD, et al., Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. Biochem Soc Trans. 2011 Aug 1;39(4):977-83

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/22/2020
MGI 6.16
The Jackson Laboratory