Gm7616 MGI Mouse Gene Detail - MGI:3647735

Sequence Map

Chr9:59858579-59859686 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647735	lncRNA gene	Chr9:59858568-59866327 (+)
129S1/SvImJ	ENSMUSG00200036504	lncRNA gene	Chr9:56977196-56984948 (+)
A/J	ENSMUSG00195041348	lncRNA gene	Chr9:56684757-56692517 (+)
AKR/J	ENSMUSG00220033506	lncRNA gene	Chr9:56834525-56842288 (+)
BALB/cJ	ENSMUSG00180020778	lncRNA gene	Chr9:56799539-56807305 (+)
C3H/HeJ	ENSMUSG00175023173	lncRNA gene	Chr9:56811456-56819214 (+)
C57BL/6NJ	ENSMUSG00215036101	lncRNA gene	Chr9:56792784-56800546 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004202	antisense lncRNA gene	Chr9:57151215-57158743 (+)
CAST/EiJ	ENSTCUG00005021925	lncRNA gene	Chr9:56733202-56740005 (+)
CBA/J	ENSMUSG00210042950	lncRNA gene	Chr9:56915756-56923450 (+)
DBA/2J	ENSMUSG00185044979	lncRNA gene	Chr9:56938142-56945906 (+)
FVB/NJ	ENSMUSG00205045297	lncRNA gene	Chr9:57253962-57261724 (+)
JF1/MsJ	ENSUMUG00000051104	lncRNA gene	Chr9:56961218-56969113 (+)
LP/J	ENSMUSG00230039695	lncRNA gene	Chr9:57176737-57184491 (+)
NOD/ShiLtJ	ENSMUSG00190044774	lncRNA gene	Chr9:57008265-57016025 (+)
NZO/HlLtJ	ENSMUSG00225028448	lncRNA gene	Chr9:57226151-57233897 (+)
PWK/PhJ	ENSLUMG00010039965	lncRNA gene	Chr9:56913448-56921112 (+)
SPRET/EiJ	ENSMSPG00010028710	lncRNA gene	Chr9:57966047-57973782 (+)
WSB/EiJ	ENSIUOG00005041482	lncRNA gene	Chr9:56415906-56423495 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	665389	NCBI Gene Model \| MGI Sequence Detail	1108	C57BL/6J	± kb
	transcript	NR_168957	RefSeq \| MGI Sequence Detail	438	C57BL/6

Summaries

All 6
Earliest

J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
Latest

J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm7616:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr85480	Chr9:59858573-59858585 (+)	0 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/08/2026 MGI 6.24