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Otogl
Gene Detail
Symbol

Name
ID
Otogl
otogelin-like
MGI:3647600
Synonyms
Gm6924
Feature Type
protein coding gene
Genetic Map
Chromosome 10
56.11 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr10:107762223-107912134 bp, - strand
From VEGA annotation of GRCm38

  149912 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:46008  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Otogl

Human
homologs
Human Homolog OTOGL, otogelin-like
NCBI Gene ID 283310
neXtProt AC  NX_Q3ZCN5
Human Synonyms  C12orf64, DFNB84B
Human Chr (Location)  12q21.31; chr12:80189371-80379090 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human OTOGL
Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process L-arabinose metabolic process
Component extracellular region
Function alpha-L-arabinofuranosidase activity
Expression
Literature Summary: (1 records)
Data Summary: Results (26)    Tissues (16)    Tissue x Stage Matrix (view)
Assay TypeResults
Immunohistochemistry 12
RNA in situ 9
RT-PCR 5
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(3) Primer pair(2) Other(1)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000043359 (Evidence)
Ensembl Gene ModelENSMUSG00000091455 (Evidence)
Entrez Gene628870 (Evidence)
UniGene336090
NIA Mouse Gene IndexU328260
Consensus CDS ProjectCCDS56747.1
International Mouse Knockout Project StatusOtogl
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000043359 VEGA Gene Model | MGI Sequence Detail 149912 C57BL/6J ±  kb
transcript OTTMUST00000113767 VEGA | MGI Sequence Detail 7071 Not Applicable 
polypeptide OTTMUSP00000063570 VEGA | MGI Sequence Detail 2325 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(14) UniProt(1)
Polymorphisms
SNPs within 2kb(1702 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007934 Alpha-L-arabinofuranosidase B
InterPro IPR006207 Cystine knot, C-terminal
InterPro IPR002919 Trypsin Inhibitor-like, cysteine rich domain
InterPro IPR014853 Uncharacterised domain, cysteine-rich
InterPro IPR001846 von Willebrand factor, type D domain
References
(Earliest) J:203658 Yariz KO, et al., Mutations in OTOGL, encoding the inner ear protein otogelin-like, cause moderate sensorineural hearing loss. Am J Hum Genet. 2012 Nov 2;91(5):872-82
All references(15)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory