Gm6756 Pseudogene Detail

Summary

• Symbol
  Gm6756
• Name
  predicted gene 6756

• Feature Type
  pseudogene
• IDs
  MGI:3647509
  NCBI Gene: 627427
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:37053449-37055068 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 19.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  34 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647509	pseudogene	Chr18:37053358-37055260 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011434	pseudogene	Chr18:35326530-35329071 (+)
A/J	MGP_AJ_G0011552	pseudogene	Chr2:19082031-19083523 (+)
AKR/J	MGP_AKRJ_G0011517	pseudogene	Chr2:19761461-19762902 (+)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0010543	pseudogene	Chr2:89041582-89043147 (-)
CAST/EiJ	MGP_CASTEiJ_G0011101	pseudogene	Chr18:35109226-35112300 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0011448	pseudogene	Chr2:19018031-19019523 (+)
FVB/NJ	MGP_FVBNJ_G0011329	pseudogene	Chr18:33423043-33425195 (+)
LP/J	MGP_LPJ_G0011394	pseudogene	Chr18:35381195-35384481 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011321	pseudogene	Chr18:38898353-38900485 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011685	pseudogene	Chr18:34917895-34919519 (+)
PWK/PhJ	MGP_PWKPhJ_G0010963	pseudogene	Chr18:33950817-33952878 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013427	pseudogene	ChrX:24996646-24998151 (+)
WSB/EiJ	MGP_WSBEiJ_G0011132	pseudogene	Chr18:34826438-34828068 (+)

Homology

• Gene Tree
  Gm6756
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  2

• Ensembl
  ENSMUSG00000063514 (Evidence)
• NCBI Gene
  627427

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000063514	Ensembl Gene Model | MGI Sequence Detail	1620	C57BL/6J
transcript	ENSMUST00000180647	Ensembl | MGI Sequence Detail	1620	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 2

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;