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Cfhr3 Pseudogene Detail
Summary
  • Symbol
    Cfhr3
  • Name
    complement factor H-related 3
Location &
Maps
more
  • Sequence Map
    Chr1:139584783-139660899 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 61.62 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    905 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647418
pseudogene Chr1:139575184-139660986 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039919
pseudogene Chr1:143669904-143753438 (-)
A/J MGP_AJ_G0039927
pseudogene Chr1:138066738-138160899 (-)
AKR/J MGP_AKRJ_G0039848
pseudogene Chr1:142245787-142824433 (-)
BALB/cJ MGP_BALBcJ_G0039904
pseudogene Chr1:138435539-138509747 (-)
C3H/HeJ MGP_C3HHeJ_G0039551
pseudogene Chr1:142325118-142392772 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040477
pseudogene Chr1:148688440-148766555 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0039519
pseudogene Chr1:153821111-153888962 (-)
DBA/2J MGP_DBA2J_G0039721
pseudogene Chr1:137076744-137136288 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0039756
pseudogene Chr1:144760485-145038196 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0040570
pseudogene Chr1:142038110-142247322 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000090623 Ensembl Gene Model | MGI Sequence Detail 76117 C57BL/6J ±  kb
transcript ENSMUST00000170441 Ensembl | MGI Sequence Detail 1022 Not Applicable  
polypeptide NP_001361030 RefSeq | MGI Sequence Detail 386 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR000436 Sushi/SCR/CCP domain
    IPR035976 Sushi/SCR/CCP superfamily
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/24/2020
MGI 6.15
The Jackson Laboratory