Gm6863 Pseudogene Detail

Summary

• Symbol
  Gm6863
• Name
  predicted gene 6863

• Feature Type
  pseudogene
• IDs
  MGI:3647386
  NCBI Gene: 628277
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:96889197-96889832 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 46.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647386	pseudogene	Chr12:96889068-96889832 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012657	pseudogene	Chr4:51424634-51425199 (+)
A/J	MGP_AJ_G0012646	pseudogene	Chr4:49454934-49455554 (+)
AKR/J	MGP_AKRJ_G0012616	pseudogene	Chr4:50810720-50811340 (+)
BALB/cJ	MGP_BALBcJ_G0012629	pseudogene	Chr4:49631353-49631973 (+)
C3H/HeJ	MGP_C3HHeJ_G0012489	pseudogene	Chr4:51361720-51362360 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012954	pseudogene	Chr4:53330841-53331481 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009182	pseudogene	Chr1:76190963-76191620 (+)
CAST/EiJ	MGP_CASTEiJ_G0009958	pseudogene	Chr1:82998843-82999968 (+)
CBA/J	MGP_CBAJ_G0012469	pseudogene	Chr4:55156207-55156827 (+)
DBA/2J	MGP_DBA2J_G0012527	pseudogene	Chr4:49432088-49432728 (+)
FVB/NJ	MGP_FVBNJ_G0012527	pseudogene	Chr4:48664918-48665538 (+)
LP/J	MGP_LPJ_G0012598	pseudogene	Chr4:51535787-51536407 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012535	pseudogene	Chr4:58382336-58382956 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012958	pseudogene	Chr4:51040789-51041409 (+)
PWK/PhJ	MGP_PWKPhJ_G0009862	pseudogene	Chr1:79654333-79654957 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009676	pseudogene	Chr1:82497405-82498038 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm6863
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm6863
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000043483 (Evidence)
• NCBI Gene
  628277

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000043483	Ensembl Gene Model | MGI Sequence Detail	636	C57BL/6J
transcript	ENSMUST00000052882	Ensembl | MGI Sequence Detail	636	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;