Gm4775 Pseudogene Detail

Summary

• Symbol
  Gm4775
• Name
  predicted gene 4775

• Feature Type
  pseudogene
• IDs
  MGI:3647362
  NCBI Gene: 212084
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:106338199-106338600 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 56.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647362	pseudogene	Chr14:106338166-106338600 (-)
129S1/SvImJ	ENSMUSG00200018140	pseudogene	Chr14:94934615-94935016 (-)
A/J	ENSMUSG00195004306	pseudogene	Chr14:95034833-95035234 (-)
AKR/J	ENSMUSG00220001208	pseudogene	Chr14:94462179-94462580 (-)
BALB/cJ	ENSMUSG00180010452	pseudogene	Chr14:94518359-94518760 (-)
C3H/HeJ	ENSMUSG00175014203	pseudogene	Chr14:96409608-96410009 (-)
C57BL/6NJ	ENSMUSG00215007597	pseudogene	Chr14:94592239-94592640 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0019583	protein coding gene	Chr14:96023457-96023849 (-)
CAST/EiJ	ENSTCUG00005002917	pseudogene	Chr14:95949795-95950197 (-)
CBA/J	ENSMUSG00210014040	pseudogene	Chr14:95098716-95099117 (-)
DBA/2J	ENSMUSG00185011068	pseudogene	Chr14:100255442-100255843 (-)
FVB/NJ	ENSMUSG00205008286	pseudogene	Chr14:94195013-94195414 (-)
JF1/MsJ	ENSUMUG00000012569	pseudogene	Chr14:111251771-111252168 (-)
LP/J	ENSMUSG00230004091	pseudogene	Chr14:112122012-112122409 (-)
NOD/ShiLtJ	ENSMUSG00190002051	pseudogene	Chr14:94887615-94888016 (-)
NZO/HlLtJ	ENSMUSG00225021605	pseudogene	Chr14:102524713-102525114 (-)
PWK/PhJ	ENSLUMG00010001163	pseudogene	Chr14:94141692-94142093 (-)
SPRET/EiJ	ENSMSPG00010009910	pseudogene	Chr14:98137065-98137475 (-)
WSB/EiJ	ENSIUOG00005006683	pseudogene	Chr14:94076113-94076514 (-)

Homology

• Gene Tree
  Gm4775
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm4775
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000090538 (Evidence)
• NCBI Gene
  212084

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090538	Ensembl Gene Model | MGI Sequence Detail	402	C57BL/6J
transcript	ENSMUST00000169588	Ensembl | MGI Sequence Detail	402	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:67314 Roix J, et al., Molecular and functional mapping of the piebald deletion complex on mouse chromosome 14. Genetics. 2001 Feb;157(2):803-15

TSS for Gm4775:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr130168	Chr14:106338614-106338623 (-)	-19 bp