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Gm5809 Pseudogene Detail
Summary
  • Symbol
    Gm5809
  • Name
    predicted pseudogene 5809
  • Feature Type
    pseudogene
  • IDs
    MGI:3647324
    NCBI Gene: 545152
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:22049141-22049668 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 16, 13.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647324
pseudogene Chr16:22049141-22049669 (+)
129S1/SvImJ MGP_129S1SvImJ_G0011259
pseudogene Chr16:19711293-19711809 (+)
A/J MGP_AJ_G0011243
pseudogene Chr16:18756512-18757923 (+)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0011214
pseudogene Chr16:18955515-18956015 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0009650
pseudogene Chr11:73483708-73491953 (-)
CAST/EiJ MGP_CASTEiJ_G0010935
pseudogene Chr16:19634962-19635487 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0011137
pseudogene Chr16:18738242-18738800 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0011234
pseudogene Chr16:19460271-19460940 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0011488
pseudogene Chr16:19498518-19499109 (+)
PWK/PhJ MGP_PWKPhJ_G0010809
pseudogene Chr16:18976244-18976983 (+)
SPRET/EiJ MGP_SPRETEiJ_G0010190
pseudogene Chr11:78682438-78690880 (-)
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 545152 NCBI Gene Model | MGI Sequence Detail 528 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory