Gm6569 Gene Detail

Summary

• Symbol
  Gm6569
• Name
  predicted gene 6569

• Feature Type
  protein coding gene
• IDs
  MGI:3647277
  NCBI Gene: 102634429
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr15:73706410-73711757 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 34.07 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647277	protein coding gene	Chr15:73701922-73711757 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0021926	protein coding gene	Chr15:73598793-73605381 (+)
A/J	MGP_AJ_G0021885	protein coding gene	Chr15:70966235-70971582 (+)
AKR/J	MGP_AKRJ_G0021867	protein coding gene	Chr15:72772225-72777572 (+)
BALB/cJ	MGP_BALBcJ_G0021892	protein coding gene	Chr15:70970069-70975416 (+)
C3H/HeJ	MGP_C3HHeJ_G0021665	protein coding gene	Chr15:72929365-72934712 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0022332	protein coding gene	Chr15:76392738-76398085 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0019868	protein coding gene	Chr15:67383568-67388935 (+)
CAST/EiJ	MGP_CASTEiJ_G0021184	protein coding gene	Chr15:73733734-73739072 (+)
CBA/J	MGP_CBAJ_G0021631	protein coding gene	Chr15:78882413-78887760 (+)
DBA/2J	MGP_DBA2J_G0021756	protein coding gene	Chr15:70561724-70567075 (+)
FVB/NJ	MGP_FVBNJ_G0021738	protein coding gene	Chr15:69584956-69590303 (+)
LP/J	MGP_LPJ_G0021828	protein coding gene	Chr15:73626926-73632273 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0021761	protein coding gene	Chr15:84234873-84240224 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0022353	protein coding gene	Chr15:73162732-73168083 (+)
PWK/PhJ	MGP_PWKPhJ_G0020925	protein coding gene	Chr15:70662999-70668505 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0020766	protein coding gene	Chr15:73058672-73064048 (+)
WSB/EiJ	MGP_WSBEiJ_G0021236	protein coding gene	Chr15:73169939-73175290 (+)

Homology

• Gene Tree
  Gm6569
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  20 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  3
• Radiation induced
  1
• Genomic Mutations
  4 involving Gm6569
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  672

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  35
• RefSeq
  12
• UniProt
  1
• CCDS
  CCDS88778.1

• Ensembl
  ENSMUSG00000086361 (Evidence)
• NCBI Gene
  102634429

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086361	Ensembl Gene Model | MGI Sequence Detail	5348	C57BL/6J
transcript	ENSMUST00000154520	Ensembl | MGI Sequence Detail	811	Not Applicable
polypeptide	ENSMUSP00000121081	Ensembl | MGI Sequence Detail	175	Not Applicable

Protein
Information

• UniProt
  1 Sequence

References

• Summaries
  All 27

  Phenotypes 20
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27

TSS for Gm6569:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr131552	Chr15:73707979-73707987 (+)	1,573 bp
Tssr131553	Chr15:73707988-73708012 (+)	1,590 bp