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Gm5279 Pseudogene Detail
Summary
  • Symbol
    Gm5279
  • Name
    predicted gene 5279
  • Feature Type
    pseudogene
  • IDs
    MGI:3647225
    NCBI Gene: 383901
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:107250280-107250990 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 46.83 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647225
pseudogene Chr3:107250271-107251015 (+)
129S1/SvImJ MGP_129S1SvImJ_G0012338
pseudogene Chr3:108825066-108825810 (+)
A/J MGP_AJ_G0012333
pseudogene Chr3:105380942-105381686 (+)
AKR/J MGP_AKRJ_G0012299
pseudogene Chr3:107956483-107957227 (+)
BALB/cJ MGP_BALBcJ_G0012316
pseudogene Chr3:105077627-105078371 (+)
C3H/HeJ MGP_C3HHeJ_G0012180
pseudogene Chr3:108294853-108295597 (+)
C57BL/6NJ MGP_C57BL6NJ_G0012628
pseudogene Chr3:112903357-112904101 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0011446
pseudogene Chr4:123248304-123249053 (-)
CAST/EiJ MGP_CASTEiJ_G0011949
pseudogene Chr3:107674272-107675013 (+)
CBA/J MGP_CBAJ_G0012159
pseudogene Chr3:116723726-116724470 (+)
DBA/2J MGP_DBA2J_G0012215
pseudogene Chr3:104581381-104582125 (+)
FVB/NJ MGP_FVBNJ_G0012219
pseudogene Chr3:102462209-102462953 (+)
LP/J MGP_LPJ_G0012285
pseudogene Chr3:110242336-110243080 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0012221
pseudogene Chr3:122850742-122851486 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0012633
pseudogene Chr3:107548713-107549459 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0011607
pseudogene Chr3:105678711-105679446 (+)
WSB/EiJ MGP_WSBEiJ_G0011980
pseudogene Chr3:108073945-108074689 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5279
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 383901 NCBI Gene Model | MGI Sequence Detail 711 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 8
    Diseases 1
    Phenotypes 4
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/22/2022
MGI 6.22
The Jackson Laboratory