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Spag11b Gene Detail
Summary
  • Symbol
    Spag11b
  • Name
    sperm associated antigen 11B
  • Feature Type
    protein coding gene
  • IDs
    MGI:3647173
    NCBI Gene: 546038
  • Gene Overview
    MyGene.info: SPAG11B
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:19140759-19143010 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 10.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    33 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647173
protein coding gene Chr8:19140759-19143010 (.)
129S1/SvImJ MGP_129S1SvImJ_G0033413
protein coding gene Chr8:16626637-16628889 (+)
A/J MGP_AJ_G0033394
protein coding gene Chr8:16053896-16056148 (+)
AKR/J MGP_AKRJ_G0033324
protein coding gene Chr8:16539357-16541608 (+)
BALB/cJ MGP_BALBcJ_G0033394
protein coding gene Chr8:16171857-16174109 (+)
C3H/HeJ MGP_C3HHeJ_G0033106
protein coding gene Chr8:16735789-16738041 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033907
protein coding gene Chr8:17167452-17169703 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030874
protein coding gene Chr8:15336305-15338545 (+)
CAST/EiJ MGP_CASTEiJ_G0032429
protein coding gene Chr8:16569442-16571694 (+)
CBA/J MGP_CBAJ_G0033080
protein coding gene Chr8:17927240-17929492 (+)
DBA/2J MGP_DBA2J_G0033234
protein coding gene Chr8:16006059-16008311 (+)
FVB/NJ MGP_FVBNJ_G0033182
protein coding gene Chr8:16013635-16015887 (+)
LP/J MGP_LPJ_G0033327
protein coding gene Chr8:16683157-16685409 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033219
protein coding gene Chr8:18055766-18058018 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033924
protein coding gene Chr8:16542555-16544806 (+)
PWK/PhJ MGP_PWKPhJ_G0032142
protein coding gene Chr8:16025344-16027595 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031983
protein coding gene Chr8:16467350-16469606 (+)
WSB/EiJ MGP_WSBEiJ_G0032546
protein coding gene Chr8:16641062-16643314 (+)



Homology
more
  • Human Ortholog
    SPAG11B, sperm associated antigen 11B
  • Vertebrate Orthologs
    6
  • Human Ortholog
    SPAG11B, sperm associated antigen 11B
    Orthology source: HomoloGene
  • Synonyms
    EDDM2B, EP2, EP2C, EP2D, HE2, HE2C, SPAG11, SPAG11A
  • Links
    NCBI Gene ID: 10407
    neXtProt AC: NX_Q08648, NX_Q6PDA7
    UniProt: Q08648

  • Chr Location
    8p23.1; chr8:7447754-7463670 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 546038 NCBI Gene Model | MGI Sequence Detail 2252 C57BL/6J ±  kb
transcript NM_001034905 RefSeq | MGI Sequence Detail 1740 C57BL/6  
polypeptide NP_001273422 RefSeq | MGI Sequence Detail 114 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory