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Ighv1-54 Gene Detail
Summary
  • Symbol
    Ighv1-54
  • Name
    immunoglobulin heavy variable V1-54
  • Feature Type
    gene segment
  • IDs
    MGI:3647133
    NCBI Gene: 211331
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:115193675-115193968 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 62.52 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647133
gene segment Chr12:115193675-115194134 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J MGP_AKRJ_G0000092
gene segment Chr12:117814012-117814470 (-)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0000116
gene segment Chr12:121589231-121589690 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0000102
gene segment Chr12:112070276-112070734 (-)
CBA/J MGP_CBAJ_G0000089
gene segment Chr12:126712987-126713469 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0000103
gene segment Chr12:118874474-118874931 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0000090
gene segment Chr12:108594723-108595181 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0000099
gene segment Chr12:118083423-118083881 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 211331 NCBI Gene Model | MGI Sequence Detail 294 C57BL/6J ±  kb
transcript M15047 GenBank | EMBL | DDBJ | MGI Sequence Detail 414 Not Specified  
polypeptide A0A075B5W5 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Gene Ontology 1
  • Earliest
    J:45812 Zhu D, et al., Immunoglobulin VH gene sequence analysis of spontaneous murine immunoglobulin-secreting B-cell tumours with clinical features of human disease. Immunology. 1998 Feb;93(2):162-70
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory