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Vmn2r60 Gene Detail
Summary
  • Symbol
    Vmn2r60
  • Name
    vomeronasal 2, receptor 60
  • Synonyms
    Casr-rs3, EG637898, Gprc2a-rs3
  • Feature Type
    protein coding gene
  • IDs
    MGI:3647050
    NCBI Gene: 637898
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr7:42116471-42195776 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 28.25 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    745 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647050
protein coding gene Chr7:42107770-42196208 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032114
protein coding gene Chr7:41950013-41986627 (+)
A/J MGP_AJ_G0032094
protein coding gene Chr7:41084232-41165098 (+)
AKR/J MGP_AKRJ_G0032026
protein coding gene Chr7:42226511-42309107 (+)
BALB/cJ MGP_BALBcJ_G0032103
protein coding gene Chr7:41343220-41428977 (+)
C3H/HeJ MGP_C3HHeJ_G0031820
protein coding gene Chr7:42896105-42973077 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032580
protein coding gene Chr7:44059262-44143940 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029609
protein coding gene Chr7:42874721-42902016 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0031787
protein coding gene Chr7:45393405-45485627 (+)
DBA/2J MGP_DBA2J_G0031937
protein coding gene Chr7:40906210-41001693 (+)
FVB/NJ MGP_FVBNJ_G0031895
protein coding gene Chr7:40650584-40720867 (+)
LP/J MGP_LPJ_G0032017
protein coding gene Chr7:42488119-42572833 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031934
protein coding gene Chr7:44295640-44396001 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032596
protein coding gene Chr7:41517132-41594221 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0031263
protein coding gene Chr7:41975430-42001526 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 637898 NCBI Gene Model | MGI Sequence Detail 79306 C57BL/6J ±  kb
transcript NM_001105057 RefSeq | MGI Sequence Detail 2562 C57BL/6  
polypeptide NP_001098527 RefSeq | MGI Sequence Detail 853 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR000337 GPCR, family 3
    IPR017978 GPCR family 3, C-terminal
    IPR000068 GPCR, family 3, extracellular calcium-sensing receptor-related
    IPR011500 GPCR, family 3, nine cysteines domain
    IPR038550 GPCR, family 3, nine cysteines domain superfamily
    IPR004073 GPCR, family 3, vomeronasal receptor, type 2
    IPR028082 Periplasmic binding protein-like I
    IPR001828 Receptor, ligand binding region
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1101780, MGI:1351348
References
more
  • Summaries
    All 15
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:29900 Ho C, et al., A mouse model of human familial hypocalciuric hypercalcemia and neonatal severe hyperparathyroidism [see comments]. Nat Genet. 1995 Dec;11(4):389-94
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/09/2019
MGI 6.13
The Jackson Laboratory