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Igkv9-124 Gene Detail
Summary
  • Symbol
    Igkv9-124
  • Name
    immunoglobulin kappa chain variable 9-124
  • Synonyms
    Gm4966
  • Feature Type
    gene segment
  • IDs
    MGI:3646892
    NCBI Gene: 243431
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:67942076-67942540 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 31.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    35 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646892
gene segment Chr6:67942074-67942540 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000116
gene segment Chr6:68050514-68050980 (-)
A/J MGP_AJ_G0000108
gene segment Chr6:65135769-65136055 (-)
AKR/J MGP_AKRJ_G0000116
gene segment Chr6:67166915-67167201 (-)
BALB/cJ MGP_BALBcJ_G0000104
gene segment Chr6:65503817-65504103 (-)
C3H/HeJ MGP_C3HHeJ_G0000148
gene segment Chr6:117018865-117019151 (+)
C57BL/6NJ MGP_C57BL6NJ_G0000155
gene segment Chr6:69669607-69670073 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0000118
gene segment Chr6:67434200-67434486 (-)
CBA/J MGP_CBAJ_G0000113
gene segment Chr6:72662131-72662428 (+)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0000103
gene segment Chr6:64250430-64250896 (-)
LP/J MGP_LPJ_G0000125
gene segment Chr6:68067152-68067625 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0000140
gene segment Chr6:67157759-67158045 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0000114
gene segment Chr6:67355679-67355965 (-)



Homology
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Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 243431 NCBI Gene Model | MGI Sequence Detail 465 C57BL/6J ±  kb
transcript AB016620 GenBank | EMBL | DDBJ | MGI Sequence Detail 405 Not Specified  
polypeptide A2IPW9 UniProt | EBI | MGI Sequence Detail 127 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003599 Immunoglobulin subtype
    IPR013106 Immunoglobulin V-set domain
References
more
  • Summaries
    All 9
    Gene Ontology 1
  • Earliest
    J:44714 Ulrich HD, et al., Germline diversity within the mouse Igk-V9 gene family. Immunogenetics. 1997;47(1):91-5
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory