Gm9364 Pseudogene Detail

Summary

• Symbol
  Gm9364
• Name
  predicted gene 9364

• Feature Type
  pseudogene
• IDs
  MGI:3646838
  NCBI Gene: 102637985
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:122655562-122656021 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 53.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646838	pseudogene	Chr3:122655540-122656327 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012391	pseudogene	Chr3:125151436-125151896 (+)
A/J	MGP_AJ_G0012386	pseudogene	Chr3:120962140-120962599 (+)
AKR/J	MGP_AKRJ_G0010493	pseudogene	Chr10:96510873-96511334 (-)
BALB/cJ	MGP_BALBcJ_G0012369	pseudogene	Chr3:120777507-120777966 (+)
C3H/HeJ	MGP_C3HHeJ_G0012231	pseudogene	Chr3:124445291-124447420 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012683	pseudogene	Chr3:129690496-129690955 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0012210	pseudogene	Chr3:134070254-134070713 (+)
DBA/2J	MGP_DBA2J_G0012267	pseudogene	Chr3:120086749-120087209 (+)
FVB/NJ	MGP_FVBNJ_G0012269	pseudogene	Chr3:117704305-117704764 (+)
LP/J	MGP_LPJ_G0012337	pseudogene	Chr3:126667921-126668381 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012273	pseudogene	Chr3:141634654-141635113 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012686	pseudogene	Chr3:123610644-123611103 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9364
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm9364
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00000106059 (Evidence)
• NCBI Gene
  102637985

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106059	Ensembl Gene Model | MGI Sequence Detail	460	C57BL/6J
transcript	ENSMUST00000199220	Ensembl | MGI Sequence Detail	460	Not Applicable

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm9364:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31529	Chr3:122653918-122653919 (+)	-1,643 bp