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Gal3st2c Gene Detail
Summary
  • Symbol
    Gal3st2c
  • Name
    galactose-3-O-sulfotransferase 2C
  • Synonyms
    Gm6086
  • Feature Type
    protein coding gene
  • IDs
    MGI:3646771
    NCBI Gene: 619597
  • Gene Overview
    MyGene.info: GAL3ST2
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr1:93990509-94011539 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 47.45 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    128 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646771
protein coding gene Chr1:93990509-94017147 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0016334
protein coding gene Chr1:92254665-92280439 (+)
AKR/J MGP_AKRJ_G0016296
protein coding gene Chr1:94955035-94998879 (+)
BALB/cJ MGP_BALBcJ_G0016289
protein coding gene Chr1:92260940-92487980 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0014467
protein coding gene Chr1:86462891-86490292 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0016270
protein coding gene Chr1:96753627-96809998 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016221
protein coding gene Chr1:105584218-105640744 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016789
protein coding gene Chr1:94964775-94999314 (+)
PWK/PhJ MGP_PWKPhJ_G0015486
protein coding gene Chr1:90717558-90802531 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015272
protein coding gene Chr1:93869917-93900412 (+)
WSB/EiJ MGP_WSBEiJ_G0015761
protein coding gene Chr1:94645919-94831682 (+)



Homology
more
  • Human Ortholog
    GAL3ST2, galactose-3-O-sulfotransferase 2
  • Vertebrate Orthologs
    11
  • Human Ortholog
    GAL3ST2, galactose-3-O-sulfotransferase 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GAL3ST-2, GP3ST
  • Links
    NCBI Gene ID: 64090
    neXtProt AC: NX_Q9H3Q3
    UniProt: Q9H3Q3

  • Chr Location
    2q37.3; chr2:241776825-241804287 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 619597 NCBI Gene Model | MGI Sequence Detail 21031 C57BL/6J ±  kb
transcript NM_001039219 RefSeq | MGI Sequence Detail 4063 C57BL/6  
polypeptide NP_001034308 RefSeq | MGI Sequence Detail 396 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR009729 Galactose-3-O-sulfotransferase
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory