Gm7580 Gene Detail

Summary

• Symbol
  Gm7580
• Name
  predicted gene 7580

• Feature Type
  lncRNA gene
• IDs
  MGI:3646746
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:74042446-74060981 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 43.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  198 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646746	lncRNA gene	Chr7:74042446-74060981 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004463	antisense lncRNA gene	Chr7:76020406-76039607 (+)
A/J	MGP_AJ_G0004443	antisense lncRNA gene	Chr7:74276700-74295459 (+)
AKR/J	MGP_AKRJ_G0004426	antisense lncRNA gene	Chr7:75852546-75874393 (+)
BALB/cJ	MGP_BALBcJ_G0004428	antisense lncRNA gene	Chr7:74031217-74049838 (+)
C3H/HeJ	MGP_C3HHeJ_G0004377	antisense lncRNA gene	Chr7:76614205-76632113 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004579	antisense lncRNA gene	Chr7:79130988-79150147 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004033	antisense lncRNA gene	Chr7:76896435-76913908 (+)
CAST/EiJ	MGP_CASTEiJ_G0004337	antisense lncRNA gene	Chr7:67469895-67488995 (+)
CBA/J	MGP_CBAJ_G0004372	antisense lncRNA gene	Chr7:81692317-81717469 (+)
DBA/2J	MGP_DBA2J_G0004386	antisense lncRNA gene	Chr7:72940564-72961786 (+)
FVB/NJ	MGP_FVBNJ_G0004403	antisense lncRNA gene	Chr7:72973660-72992759 (+)
LP/J	MGP_LPJ_G0004467	antisense lncRNA gene	Chr7:77238222-77258983 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004393	antisense lncRNA gene	Chr7:81830532-81852159 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004577	antisense lncRNA gene	Chr7:75317053-75336770 (+)
PWK/PhJ	MGP_PWKPhJ_G0004290	antisense lncRNA gene	Chr7:66125497-66143949 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004231	antisense lncRNA gene	Chr7:62401716-62429039 (+)
WSB/EiJ	MGP_WSBEiJ_G0004376	antisense lncRNA gene	Chr7:75680272-75699403 (+)

Homology

• Gene Tree
  Gm7580
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm7580
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085161 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085161	Ensembl Gene Model | MGI Sequence Detail	18536	C57BL/6J
transcript	ENSMUST00000132826	Ensembl | MGI Sequence Detail	497	Not Applicable

References

• Summaries
  All 15

  Phenotypes 11
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67