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Gm5621 Pseudogene Detail
Summary
  • Symbol
    Gm5621
  • Name
    predicted gene 5621
  • Feature Type
    pseudogene
  • IDs
    MGI:3646701
    NCBI Gene: 434434
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:105560122-105560761 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 56.76 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646701
pseudogene Chr9:105560043-105560823 (-)
129S1/SvImJ MGP_129S1SvImJ_G0013007
pseudogene Chr5:20519404-20520011 (+)
A/J MGP_AJ_G0012993
pseudogene Chr5:19864252-19864861 (+)
AKR/J MGP_AKRJ_G0012959
pseudogene Chr5:20627177-20627786 (+)
BALB/cJ MGP_BALBcJ_G0012973
pseudogene Chr5:20340331-20340938 (+)
C3H/HeJ MGP_C3HHeJ_G0012822
pseudogene Chr5:20716820-20717429 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0011528
pseudogene Chr5:17864993-17865589 (+)
CAST/EiJ MGP_CASTEiJ_G0012554
pseudogene Chr5:20025044-20025653 (+)
CBA/J MGP_CBAJ_G0012790
pseudogene Chr5:22297445-22298054 (+)
DBA/2J MGP_DBA2J_G0012868
pseudogene Chr5:20161225-20161832 (+)
FVB/NJ MGP_FVBNJ_G0012872
pseudogene Chr5:19559313-19559920 (+)
LP/J MGP_LPJ_G0012939
pseudogene Chr5:20926649-20927256 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0012887
pseudogene Chr5:23504576-23505183 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0013331
pseudogene Chr5:20237323-20237930 (+)
PWK/PhJ MGP_PWKPhJ_G0012375
pseudogene Chr5:19188410-19189019 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0012594
pseudogene Chr5:20336016-20336623 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101597 Ensembl Gene Model | MGI Sequence Detail 640 C57BL/6J ±  kb
transcript ENSMUST00000187303 Ensembl | MGI Sequence Detail 640 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, 2/14/1995;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/30/2021
MGI 6.16
The Jackson Laboratory