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Defb46 Gene Detail
Summary
  • Symbol
    Defb46
  • Name
    defensin beta 46
  • Feature Type
    protein coding gene
  • IDs
    MGI:3646525
    NCBI Gene: 574081
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr8:19239916-19242143 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 10.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    79 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646525
protein coding gene Chr8:19239916-19242143 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033418
protein coding gene Chr8:16715940-16718137 (+)
A/J MGP_AJ_G0033399
protein coding gene Chr8:16162240-16165412 (+)
AKR/J MGP_AKRJ_G0033329
protein coding gene Chr8:16637899-16640126 (+)
BALB/cJ MGP_BALBcJ_G0033399
protein coding gene Chr8:16271373-16273570 (+)
C3H/HeJ MGP_C3HHeJ_G0033111
protein coding gene Chr8:16830780-16832977 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033912
protein coding gene Chr8:17260008-17262235 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0032434
protein coding gene Chr8:16658066-16664748 (+)
CBA/J MGP_CBAJ_G0033085
protein coding gene Chr8:18033277-18035470 (+)
DBA/2J MGP_DBA2J_G0033239
protein coding gene Chr8:16098429-16100626 (+)
FVB/NJ MGP_FVBNJ_G0033187
protein coding gene Chr8:16104821-16106998 (+)
LP/J MGP_LPJ_G0033332
protein coding gene Chr8:16773644-16775861 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033224
protein coding gene Chr8:18170423-18173695 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033929
protein coding gene Chr8:16639482-16641709 (+)
PWK/PhJ MGP_PWKPhJ_G0032147
protein coding gene Chr8:16254273-16256500 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031988
protein coding gene Chr8:16568373-16570575 (+)
WSB/EiJ MGP_WSBEiJ_G0032551
protein coding gene Chr8:16731164-16733379 (+)



Homology
less
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 574081 NCBI Gene Model | MGI Sequence Detail 2228 C57BL/6J ±  kb
transcript NM_001025351 RefSeq | MGI Sequence Detail 174 Not Specified  
polypeptide NP_001020522 RefSeq | MGI Sequence Detail 57 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 10
    Gene Ontology 1
  • Earliest
    J:156769 Amid C, et al., Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. BMC Genomics. 2009;10:606
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory