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Gm5398 Pseudogene Detail
Summary
  • Symbol
    Gm5398
  • Name
    predicted gene 5398
  • Feature Type
    pseudogene
  • IDs
    MGI:3646383
    NCBI Gene: 385474
  • Alliance
Location &
Maps
more
  • Sequence Map
    ChrX:76333438-76334421 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome X, 38.30 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646383
pseudogene ChrX:76333230-76334462 (-)
129S1/SvImJ MGP_129S1SvImJ_G0014534
pseudogene ChrX:73108468-73109520 (-)
A/J MGP_AJ_G0014544
pseudogene ChrX:73377705-73378689 (-)
AKR/J MGP_AKRJ_G0014470
pseudogene ChrX:75296572-75297544 (-)
BALB/cJ MGP_BALBcJ_G0014497
pseudogene ChrX:72344846-72346160 (-)
C3H/HeJ MGP_C3HHeJ_G0014330
pseudogene ChrX:73606038-73607021 (-)
C57BL/6NJ MGP_C57BL6NJ_G0014973
pseudogene ChrX:75464929-75465912 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012711
pseudogene ChrX:72715219-72716216 (-)
CAST/EiJ MGP_CASTEiJ_G0013960
pseudogene ChrX:58880745-58881719 (-)
CBA/J MGP_CBAJ_G0014315
pseudogene ChrX:77448954-77449939 (-)
DBA/2J MGP_DBA2J_G0014397
pseudogene ChrX:72809263-72810241 (-)
FVB/NJ MGP_FVBNJ_G0014386
pseudogene ChrX:72089462-72090440 (-)
LP/J MGP_LPJ_G0014492
pseudogene ChrX:73996634-73997610 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0014428
pseudogene ChrX:80173679-80174659 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0014939
pseudogene ChrX:72970720-72971695 (-)
PWK/PhJ MGP_PWKPhJ_G0013764
pseudogene ChrX:56954427-56955402 (-)
SPRET/EiJ MGP_SPRETEiJ_G0013565
pseudogene ChrX:59712808-59713781 (-)
WSB/EiJ MGP_WSBEiJ_G0014035
pseudogene ChrX:72174893-72175871 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000084202 Ensembl Gene Model | MGI Sequence Detail 984 C57BL/6J ±  kb
transcript ENSMUST00000121933 Ensembl | MGI Sequence Detail 984 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory