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Gm5475 Gene Detail
Summary
  • Symbol
    Gm5475
  • Name
    predicted gene 5475
Location &
Maps
more
  • Sequence Map
    Chr15:100423193-100428150 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 56.30 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646320
protein coding gene Chr15:100422147-100428150 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022351
protein coding gene Chr15:102379418-102385410 (+)
A/J MGP_AJ_G0022313
protein coding gene Chr15:98346645-98352649 (+)
AKR/J MGP_AKRJ_G0022289
protein coding gene Chr15:101349507-101355511 (+)
BALB/cJ MGP_BALBcJ_G0022317
protein coding gene Chr15:98468474-98474466 (+)
C3H/HeJ MGP_C3HHeJ_G0022087
protein coding gene Chr15:101429460-101435464 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022765
protein coding gene Chr15:106219210-106225332 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020290
protein coding gene Chr15:94119890-94126284 (+)
CAST/EiJ MGP_CASTEiJ_G0021612
protein coding gene Chr15:102295961-102304536 (+)
CBA/J MGP_CBAJ_G0022056
protein coding gene Chr15:109866044-109872036 (+)
DBA/2J MGP_DBA2J_G0022183
protein coding gene Chr15:97713799-97719806 (+)
FVB/NJ MGP_FVBNJ_G0022162
protein coding gene Chr15:96728012-96734010 (+)
LP/J MGP_LPJ_G0022254
protein coding gene Chr15:102555683-102561675 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022183
protein coding gene Chr15:113594808-113600800 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022779
protein coding gene Chr15:101359851-101365843 (+)
PWK/PhJ MGP_PWKPhJ_G0021351
protein coding gene Chr15:97840320-97846304 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021183
protein coding gene Chr15:101252255-101258183 (+)
WSB/EiJ MGP_WSBEiJ_G0021662
protein coding gene Chr15:101986246-101992239 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    19 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 432982 NCBI Gene Model | MGI Sequence Detail 4958 C57BL/6J ±  kb
transcript NR_040351 RefSeq | MGI Sequence Detail 2320 C57BL/6  
polypeptide D3YV11 UniProt | EBI | MGI Sequence Detail 175 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
References
more
  • Summaries
    All 28
    Diseases 1
    Phenotypes 19
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory