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Gbp11 Pseudogene Detail
Summary
  • Symbol
    Gbp11
  • Name
    guanylate binding protein 11
  • Synonyms
    Gm7141
  • Feature Type
    polymorphic pseudogene
  • IDs
    MGI:3646307
    NCBI Gene: 634650
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:105323042-105346472 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 50.68 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    112 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646307
polymorphic pseudogene Chr5:105323026-105346476 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0009930
polymorphic pseudogene Chr5:103081528-103109101 (-)
AKR/J MGP_AKRJ_G0009913
polymorphic pseudogene Chr5:106216769-106245654 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0009846
polymorphic pseudogene Chr5:106910199-106951012 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010163
polymorphic pseudogene Chr5:111642489-111671156 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0009664
polymorphic pseudogene Chr5:105809221-105830843 (-)
CBA/J MGP_CBAJ_G0009820
polymorphic pseudogene Chr5:115408239-115436725 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0009866
polymorphic pseudogene Chr5:101994774-102061060 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0009832
polymorphic pseudogene Chr5:120193971-120444786 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010134
polymorphic pseudogene Chr5:105990255-106012124 (-)
PWK/PhJ MGP_PWKPhJ_G0028649
polymorphic pseudogene Chr5:101780710-101783434 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    GBP6, guanylate binding protein family member 6
  • Vertebrate Orthologs
    22
  • Human Ortholog
    GBP6, guanylate binding protein family member 6
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 163351
    neXtProt AC: NX_Q6ZN66
    UniProt: Q6ZN66

  • Chr Location
    1p22.2; chr1:89363877-89388160 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092021 Ensembl Gene Model | MGI Sequence Detail 23431 C57BL/6J ±  kb
transcript ENSMUST00000100960 Ensembl | MGI Sequence Detail 2692 Not Applicable  
polypeptide ENSMUSP00000098520 Ensembl | MGI Sequence Detail 619 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR030386 GB1/RHD3-type guanine nucleotide-binding (G) domain
    IPR003191 Guanylate-binding protein/Atlastin, C-terminal
    IPR037684 Guanylate-binding protein, C-terminal
    IPR036543 Guanylate-binding protein, C-terminal domain superfamily
    IPR015894 Guanylate-binding protein, N-terminal
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory