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Casp16 Pseudogene Detail
Summary
  • Symbol
    Casp16
  • Name
    caspase 16, apoptosis-related cysteine peptidase
  • Synonyms
    Casp16, Casp16-ps, Gm5146
Location &
Maps
more
  • Sequence Map
    Chr17:23770054-23774304 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 11.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    219 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646305
 polymorphic pseudogene Chr17:23769939-23774678 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J ENSMUSG00220025744
 protein coding gene Chr17:19267896-19272629 (-)
BALB/cJ no annotation
C3H/HeJ ENSMUSG00175038291
 protein coding gene Chr17:19281060-19285793 (-)
C57BL/6NJ ENSMUSG00215039384
 protein coding gene Chr17:19277656-19282395 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0008950
 polymorphic pseudogene Chr17:19389935-19392515 (-)
CAST/EiJ ENSTCUG00005021466
 protein coding gene Chr17:19860120-19864872 (-)
CBA/J ENSMUSG00210035777
 protein coding gene Chr17:19119927-19124660 (-)
DBA/2J no annotation
FVB/NJ ENSMUSG00205015403
 protein coding gene Chr17:19571034-19575767 (-)
JF1/MsJ ENSUMUG00000047132
 protein coding gene Chr17:20774380-20779142 (-)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190028621
 protein coding gene Chr17:19199951-19204690 (-)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010019099
 protein coding gene Chr17:18671811-18676612 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    CASP16P, caspase 16, pseudogene
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CASP16P, caspase 16, pseudogene
  • Synonyms
    CASP16
  • Links
    NCBI Gene ID: 197350

  • Chr Location
    16p13.3; chr16:3144015-3149946 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    17
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 381070 NCBI Gene Model | MGI Sequence Detail 4251 C57BL/6J ±  kb
transcript BN000368 GenBank | ENA | DDBJ | MGI Sequence Detail 531 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:6280474
References
more
  • Summaries
    All 8
  • Earliest
    J:95646 Puente XS, et al., A genomic analysis of rat proteases and protease inhibitors. Genome Res. 2004 Apr;14(4):609-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory