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Tmem200c Gene Detail
Summary
  • Symbol
    Tmem200c
  • Name
    transmembrane protein 200C
  • Synonyms
    Gm6338
  • Feature Type
    protein coding gene
  • IDs
    MGI:3646281
    NCBI Gene: 622645
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:68837136-68843138 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 39.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646281
protein coding gene Chr17:68826623-68843139 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023995
protein coding gene Chr17:71146327-71152343 (+)
A/J MGP_AJ_G0023953
protein coding gene Chr17:69002074-69008082 (+)
AKR/J MGP_AKRJ_G0023922
protein coding gene Chr17:69982595-69988606 (+)
BALB/cJ MGP_BALBcJ_G0023954
protein coding gene Chr17:68942437-68948478 (+)
C3H/HeJ MGP_C3HHeJ_G0023718
protein coding gene Chr17:70894298-70900318 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024400
protein coding gene Chr17:73722407-73728461 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021846
protein coding gene Chr17:64901046-64907031 (+)
CAST/EiJ MGP_CASTEiJ_G0023200
protein coding gene Chr17:71284590-71291698 (+)
CBA/J MGP_CBAJ_G0023694
protein coding gene Chr17:76790650-76798183 (+)
DBA/2J MGP_DBA2J_G0023822
protein coding gene Chr17:67699868-67706813 (+)
FVB/NJ MGP_FVBNJ_G0023788
protein coding gene Chr17:67185487-67191503 (+)
LP/J MGP_LPJ_G0023904
protein coding gene Chr17:71888788-71894804 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023816
protein coding gene Chr17:76759981-76766792 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024444
protein coding gene Chr17:70465371-70472244 (+)
PWK/PhJ MGP_PWKPhJ_G0022946
protein coding gene Chr17:67039783-67045795 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022757
protein coding gene Chr17:67184327-67190327 (+)
WSB/EiJ MGP_WSBEiJ_G0023266
protein coding gene Chr17:71216004-71223640 (+)



Homology
more
  • Human Ortholog
    TMEM200C, transmembrane protein 200C
  • Vertebrate Orthologs
    8
  • Human Ortholog
    TMEM200C, transmembrane protein 200C
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TTMA
  • Links
    NCBI Gene ID: 645369
    neXtProt AC: NX_A6NKL6
    UniProt: A6NKL6

  • Chr Location
    18p11.31; chr18:5889412-5898701 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 622645 NCBI Gene Model | MGI Sequence Detail 6003 C57BL/6J ±  kb
transcript NM_001206661 RefSeq | MGI Sequence Detail 3213 C57BL/6  
polypeptide NP_001193590 RefSeq | MGI Sequence Detail 637 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR018787 Protein of unknown function DUF2371, TMEM200
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 11
  • Earliest
    J:23000 MGD Nomenclature Committee, 2/14/1995;
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory