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Tmem200c Gene Detail
Summary
  • Symbol
    Tmem200c
  • Name
    transmembrane protein 200C
  • Synonyms
    Gm6338
  • Feature Type
    protein coding gene
  • IDs
    MGI:3646281
    NCBI Gene: 622645
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:69144084-69150133 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 39.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    183 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646281
 protein coding gene Chr17:69133618-69150134 (+)
129S1/SvImJ ENSMUSG00200038387
 protein coding gene Chr17:64479685-64496213 (+)
A/J ENSMUSG00195017675
 protein coding gene Chr17:65820585-65837094 (+)
AKR/J ENSMUSG00220017273
 protein coding gene Chr17:64893363-64909875 (+)
BALB/cJ ENSMUSG00180018161
 protein coding gene Chr17:65557938-65574446 (+)
C3H/HeJ ENSMUSG00175028195
 protein coding gene Chr17:64872771-64889309 (+)
C57BL/6NJ ENSMUSG00215017512
 protein coding gene Chr17:64525095-64541612 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021846
 protein coding gene Chr17:64901046-64907031 (+)
CAST/EiJ ENSTCUG00005025988
 protein coding gene Chr17:65447734-65464300 (+)
CBA/J ENSMUSG00210026723
 protein coding gene Chr17:64672570-64689105 (+)
DBA/2J ENSMUSG00185022061
 protein coding gene Chr17:67516416-67532954 (+)
FVB/NJ ENSMUSG00205012825
 protein coding gene Chr17:65299317-65315857 (+)
JF1/MsJ ENSUMUG00000038388
 protein coding gene Chr17:67182598-67199171 (+)
LP/J ENSMUSG00230013082
 protein coding gene Chr17:68497830-68514358 (+)
NOD/ShiLtJ ENSMUSG00190031161
 protein coding gene Chr17:64655074-64671583 (+)
NZO/HlLtJ ENSMUSG00225028926
 protein coding gene Chr17:70775421-70791930 (+)
PWK/PhJ ENSLUMG00010028698
 protein coding gene Chr17:64451425-64467997 (+)
SPRET/EiJ ENSMSPG00010015185
 protein coding gene Chr17:64818492-64834757 (+)
WSB/EiJ ENSIUOG00005031654
 protein coding gene Chr17:65534444-65550984 (+)



Homology
more
  • Human Ortholog
    TMEM200C, transmembrane protein 200C
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM200C, transmembrane protein 200C
  • Synonyms
    TTMA
  • Links
    NCBI Gene ID: 645369
    UniProt: A6NKL6

  • Chr Location
    18p11.31; chr18:5882072-5896174 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 622645 NCBI Gene Model | MGI Sequence Detail 6050 C57BL/6J ±  kb
transcript NM_001206661 RefSeq | MGI Sequence Detail 3260 C57BL/6  
polypeptide NP_001193590 RefSeq | MGI Sequence Detail 637 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR018787 Protein of unknown function DUF2371, TMEM200
  • GlyGen
    J3QK46 4 sites, 2 N-linked glycans (2 sites)
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory