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Tmem200c Gene Detail
Summary
  • Symbol
    Tmem200c
  • Name
    transmembrane protein 200C
  • Synonyms
    Gm6338
  • Feature Type
    protein coding gene
  • IDs
    MGI:3646281
    NCBI Gene: 622645
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:68837136-68843138 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 39.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646281
protein coding gene Chr17:68837136-68843138 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023995
protein coding gene Chr17:71146327-71152343 (+)
A/J MGP_AJ_G0023953
protein coding gene Chr17:69002074-69008082 (+)
AKR/J MGP_AKRJ_G0023922
protein coding gene Chr17:69982595-69988606 (+)
BALB/cJ MGP_BALBcJ_G0023954
protein coding gene Chr17:68942437-68948478 (+)
C3H/HeJ MGP_C3HHeJ_G0023718
protein coding gene Chr17:70894298-70900318 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024400
protein coding gene Chr17:73722407-73728461 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021846
protein coding gene Chr17:64901046-64907031 (+)
CAST/EiJ MGP_CASTEiJ_G0023200
protein coding gene Chr17:71284590-71291698 (+)
CBA/J MGP_CBAJ_G0023694
protein coding gene Chr17:76790650-76798183 (+)
DBA/2J MGP_DBA2J_G0023822
protein coding gene Chr17:67699868-67706813 (+)
FVB/NJ MGP_FVBNJ_G0023788
protein coding gene Chr17:67185487-67191503 (+)
LP/J MGP_LPJ_G0023904
protein coding gene Chr17:71888788-71894804 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023816
protein coding gene Chr17:76759981-76766792 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024444
protein coding gene Chr17:70465371-70472244 (+)
PWK/PhJ MGP_PWKPhJ_G0022946
protein coding gene Chr17:67039783-67045795 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022757
protein coding gene Chr17:67184327-67190327 (+)
WSB/EiJ MGP_WSBEiJ_G0023266
protein coding gene Chr17:71216004-71223640 (+)



Homology
more
  • Human Ortholog
    TMEM200C, transmembrane protein 200C
  • Vertebrate Orthologs
    8
  • Human Ortholog
    TMEM200C, transmembrane protein 200C
    Orthology source: HomoloGene, HGNC
  • Synonyms
    TTMA
  • Links
    NCBI Gene ID: 645369
    neXtProt AC: NX_A6NKL6
    UniProt: A6NKL6

  • Chr Location
    18p11.31; chr18:5889412-5898701 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 622645 NCBI Gene Model | MGI Sequence Detail 6003 C57BL/6J ±  kb
transcript NM_001206661 RefSeq | MGI Sequence Detail 3213 C57BL/6  
polypeptide NP_001193590 RefSeq | MGI Sequence Detail 637 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR018787 Protein of unknown function DUF2371, TMEM200
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 11
  • Earliest
    J:23000 MGD Nomenclature Committee, 2/14/1995;
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/15/2019
MGI 6.13
The Jackson Laboratory