Gm6798 Pseudogene Detail

Summary

• Symbol
  Gm6798
• Name
  predicted gene 6798

• Feature Type
  pseudogene
• IDs
  MGI:3646258
  NCBI Gene: 627857
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:8520705-8521064 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 3.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  16 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646258	pseudogene	ChrX:8520704-8521064 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014286	pseudogene	ChrX:3289762-3290121 (+)
A/J	MGP_AJ_G0014301	pseudogene	ChrX:3355866-3356225 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0014251	pseudogene	ChrX:3283507-3283866 (+)
C3H/HeJ	MGP_C3HHeJ_G0014082	pseudogene	ChrX:3416279-3416638 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014704	pseudogene	ChrX:3374279-3374638 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010217	pseudogene	Chr17:73898173-73898462 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0014065	pseudogene	ChrX:3579703-3580062 (+)
DBA/2J	MGP_DBA2J_G0014148	pseudogene	ChrX:3317226-3317585 (+)
FVB/NJ	MGP_FVBNJ_G0014145	pseudogene	ChrX:3216107-3216466 (+)
LP/J	MGP_LPJ_G0014239	pseudogene	ChrX:3388502-3388861 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010721	pseudogene	Chr11:108705752-108706111 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014674	pseudogene	ChrX:3299265-3299624 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0013337	pseudogene	ChrX:3196604-3196896 (+)
WSB/EiJ	MGP_WSBEiJ_G0013796	pseudogene	ChrX:3337337-3337696 (+)

Homology

• Gene Tree
  Gm6798
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000082496 (Evidence)
• NCBI Gene
  627857

Representative Sequences			Length	Strain/Species
genomic	627857	NCBI Gene Model | MGI Sequence Detail	360	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;