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Gm5771
Gene Detail
Symbol

Name
ID
Gm5771
predicted gene 5771
MGI:3646222
Feature Type
protein coding gene
Genetic Map
Chromosome 6
19.52 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr6:41392356-41397256 bp, + strand
From NCBI annotation of GRCm38

  4901 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:88408  Vertebrate Homology Class
4 mouse; 5 rat

Protein SuperFamily: trypsin
Gene Tree: Gm5771

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Gm5771 interacts with 9 markers (Mir103-1, Mir103-2, Mir107, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
Expression
cDNA source data(2)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(2) cDNA(2)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000058119 (Evidence)
Entrez Gene436523 (Evidence)
Consensus CDS ProjectCCDS20048.1
International Mouse Knockout Project StatusGm5771
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 436523 NCBI Gene Model | MGI Sequence Detail 4901 C57BL/6J ±  kb
transcript NM_001038997 RefSeq | MGI Sequence Detail 824 Not Specified 
polypeptide NP_001034086 RefSeq | MGI Sequence Detail 245 Not Specified 

For the selected sequences
All sequences(12) RefSeq(3) UniProt(2)
Polymorphisms
SNPs within 2kb(41 from dbSNP Build 137)    SNPs within 2kb including multiple locations(83)
Protein-related
information
ResourceIDDescription
InterPro IPR001254 Peptidase S1
InterPro IPR001314 Peptidase S1A, chymotrypsin-type
InterPro IPR018114 Peptidase S1, trypsin family, active site
InterPro IPR009003 Trypsin-like cysteine/serine peptidase domain
References
(Earliest) J:23000 MGD Nomenclature Committee, 2/14/1995;
(Latest) J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;
All references(11)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory