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Gm5771
Gene Detail
Symbol

Name
ID
Gm5771
predicted gene 5771
MGI:3646222
Feature Type
protein coding gene
Genetic Map
Chromosome 6
19.52 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr6:41392356-41397230 bp, + strand
From VEGA annotation of GRCm38

  4875 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:88408  Vertebrate Homology Class
4 mouse; 5 rat

Protein SuperFamily: trypsin
Gene Tree: Gm5771

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Gm5771 interacts with 9 markers (Mir103-1, Mir103-2, Mir107, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process digestion, proteolysis
Component extracellular space
Function serine-type endopeptidase activity
Expression
cDNA source data(2)
Other mouse links: GEO   Expression Atlas
Molecular
reagents
All nucleic(2) cDNA(2)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000051421 (Evidence)
Ensembl Gene Model ENSMUSG00000058119 (Evidence)
Entrez Gene 436523 (Evidence)
Consensus CDS Project CCDS20048.1
International Mouse Phenotyping Consortium Status Gm5771
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000051421 VEGA Gene Model | MGI Sequence Detail 4875 C57BL/6J ±  kb
transcript OTTMUST00000129978 VEGA | MGI Sequence Detail 798 Not Applicable 
polypeptide OTTMUSP00000069740 VEGA | MGI Sequence Detail 245 Not Applicable 

For the selected sequences
All sequences(14) RefSeq(3) UniProt(1)
Polymorphisms
SNPs within 2kb(41 from dbSNP Build 137)    SNPs within 2kb including multiple locations(83)
Protein-related
information
ResourceIDDescription
InterPro IPR001254 Peptidase S1
InterPro IPR001314 Peptidase S1A, chymotrypsin-type
InterPro IPR018114 Peptidase S1, trypsin family, active site
InterPro IPR009003 Trypsin-like cysteine/serine peptidase domain
References
(Earliest) J:23000 MGD Nomenclature Committee, 2/14/1995;
(Latest) J:161428 Gaudet P, et al., Annotation inferences using phylogenetic trees. 2010;
All references(13)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory