Cldn34-ps Pseudogene Detail

Summary

• Symbol
  Cldn34-ps
• Name
  claudin 34, pseudogene
• Synonyms
  Gm6927

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3645962
  NCBI Gene: 628893
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:76718442-76719041 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 38.31 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645962	pseudogene	ChrX:76718275-76734904 (-)
129S1/SvImJ	ENSMUSG00200044006	pseudogene	ChrX:58759324-58759923 (-)
A/J	ENSMUSG00195041836	pseudogene	ChrX:62447152-62447751 (-)
AKR/J	ENSMUSG00220047326	pseudogene	ChrX:57556640-57557239 (-)
BALB/cJ	ENSMUSG00180051258	pseudogene	ChrX:59022846-59023445 (-)
C3H/HeJ	ENSMUSG00175036554	pseudogene	ChrX:62600506-62601105 (-)
C57BL/6NJ	ENSMUSG00215042722	pseudogene	ChrX:59124147-59124746 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012713	pseudogene	ChrX:73083426-73084025 (-)
CAST/EiJ	ENSTCUG00005043721	pseudogene	ChrX:60387735-60388334 (-)
CBA/J	ENSMUSG00210045188	pseudogene	ChrX:59288292-59288891 (-)
DBA/2J	ENSMUSG00185038522	pseudogene	ChrX:71702694-71703293 (-)
FVB/NJ	ENSMUSG00205040161	pseudogene	ChrX:58612220-58612819 (-)
JF1/MsJ	ENSUMUG00000028019	pseudogene	ChrX:92498403-92499002 (-)
LP/J	ENSMUSG00230037343	pseudogene	ChrX:78313292-78313891 (-)
NOD/ShiLtJ	ENSMUSG00190044954	pseudogene	ChrX:58579427-58580026 (-)
NZO/HlLtJ	ENSMUSG00225048076	pseudogene	ChrX:83486376-83486975 (-)
PWK/PhJ	ENSLUMG00010047297	pseudogene	ChrX:58173353-58173952 (-)
SPRET/EiJ	ENSMSPG00010023185	pseudogene	ChrX:61628380-61628979 (-)
WSB/EiJ	ENSIUOG00005049465	pseudogene	ChrX:59298009-59298608 (-)

Homology

• Gene Tree
  Cldn34-ps
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  6

• Ensembl
  ENSMUSG00000087152 (Evidence)
• NCBI Gene
  628893

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087152	Ensembl Gene Model | MGI Sequence Detail	600	C57BL/6J
transcript	ENSMUST00000145498	Ensembl | MGI Sequence Detail	600	Not Applicable
polypeptide	NP_001095055	RefSeq | MGI Sequence Detail	212	mixed

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;