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Tm4sf19 Gene Detail
Summary
  • Symbol
    Tm4sf19
  • Name
    transmembrane 4 L six family member 19
  • Synonyms
    EG277203
  • Feature Type
    protein coding gene
  • IDs
    MGI:3645933
    NCBI Gene: 277203
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:32400506-32408227 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 22.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    83 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645933
protein coding gene Chr16:32400012-32409234 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022737
protein coding gene Chr16:30467718-30476975 (+)
A/J MGP_AJ_G0022702
protein coding gene Chr16:29027243-29039306 (+)
AKR/J MGP_AKRJ_G0022675
protein coding gene Chr16:30090014-30097690 (+)
BALB/cJ MGP_BALBcJ_G0022704
protein coding gene Chr16:29179840-29187891 (+)
C3H/HeJ MGP_C3HHeJ_G0022469
protein coding gene Chr16:30217553-30225060 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023153
protein coding gene Chr16:31124214-31131990 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020671
protein coding gene Chr16:29407891-29415894 (+)
CAST/EiJ MGP_CASTEiJ_G0021997
protein coding gene Chr16:30340859-30350300 (+)
CBA/J MGP_CBAJ_G0022439
protein coding gene Chr16:32369266-32379798 (+)
DBA/2J MGP_DBA2J_G0022572
protein coding gene Chr16:28879804-28887762 (+)
FVB/NJ MGP_FVBNJ_G0022547
protein coding gene Chr16:28865608-28873287 (+)
LP/J MGP_LPJ_G0022639
protein coding gene Chr16:30238871-30246545 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022566
protein coding gene Chr16:31816160-31823777 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023165
protein coding gene Chr16:30070925-30079049 (+)
PWK/PhJ MGP_PWKPhJ_G0021736
protein coding gene Chr16:29200477-29208183 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021567
protein coding gene Chr16:29860654-29868286 (+)
WSB/EiJ MGP_WSBEiJ_G0022041
protein coding gene Chr16:30019464-30027655 (+)



Homology
more
  • Human Ortholog
    TM4SF19, transmembrane 4 L six family member 19
  • Vertebrate Orthologs
    8
  • Human Ortholog
    TM4SF19, transmembrane 4 L six family member 19
    Orthology source: HomoloGene, HGNC
  • Synonyms
    OCTM4
  • Links
    NCBI Gene ID: 116211
    neXtProt AC: NX_Q96DZ7
    UniProt: Q96DZ7

  • Chr Location
    3q29; chr3:196323546-196338420 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079625 Ensembl Gene Model | MGI Sequence Detail 7722 C57BL/6J ±  kb
transcript ENSMUST00000115149 Ensembl | MGI Sequence Detail 1257 Not Applicable  
polypeptide ENSMUSP00000110802 Ensembl | MGI Sequence Detail 206 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR008661 L6 membrane
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:175542 Anderson KR, et al., The L6 domain tetraspanin Tm4sf4 regulates endocrine pancreas differentiation and directed cell migration. Development. 2011 Aug;138(15):3213-24
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/10/2019
MGI 6.14
The Jackson Laboratory