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Dppa3-ps Pseudogene Detail
Summary
  • Symbol
    Dppa3-ps
  • Name
    developmental pluripotency-associated 3, pseudogene
  • Synonyms
    Gm6269
  • Feature Type
    pseudogene
  • IDs
    MGI:3645894
    NCBI Gene: 621903
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:36807300-36807750 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 21.93 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645894
 pseudogene ChrX:36807033-36807850 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039666
 pseudogene Chr14:23521750-23522200 (+)
A/J MGP_AJ_G0039765
 pseudogene ChrX:32479479-32479929 (+)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0039734
 pseudogene ChrX:32394383-32394833 (-)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0036903
 pseudogene Chr7:11822960-11823410 (-)
CAST/EiJ MGP_CASTEiJ_G0038419
 pseudogene Chr14:23339985-23340435 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0039601
 pseudogene ChrX:33003526-33003976 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039520
 pseudogene ChrX:34549567-34550017 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040402
 pseudogene ChrX:32600983-32601433 (-)
PWK/PhJ MGP_PWKPhJ_G0038093
 pseudogene Chr14:22106329-22106779 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037844
 pseudogene Chr14:23077643-23078093 (+)
WSB/EiJ MGP_WSBEiJ_G0038651
 pseudogene Chr14:23554790-23555240 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    16
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080241 Ensembl Gene Model | MGI Sequence Detail 451 C57BL/6J ±  kb
transcript ENSMUST00000116499 Ensembl | MGI Sequence Detail 451 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:229199 Song HW, et al., shRNA off-target effects in vivo: impaired endogenous siRNA expression and spermatogenic defects. PLoS One. 2015;10(3):e0118549
  • Latest
    J:240574 Song HW, et al., The Homeobox Transcription Factor RHOX10 Drives Mouse Spermatogonial Stem Cell Establishment. Cell Rep. 2016 Sep 27;17(1):149-64
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory