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S100a11-ps Pseudogene Detail
Summary
  • Symbol
    S100a11-ps
  • Name
    S100 calcium binding protein A11, pseudogene
  • Synonyms
    Gm5068
  • Feature Type
    pseudogene
  • IDs
    MGI:3645720
    NCBI Gene: 277089
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:73961148-73961447 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 32.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645720
pseudogene Chr12:73961142-73961447 (.)
129S1/SvImJ MGP_129S1SvImJ_G0010917
pseudogene Chr12:73907393-73907698 (+)
A/J MGP_AJ_G0010922
pseudogene Chr12:71133209-71133514 (+)
AKR/J MGP_AKRJ_G0010877
pseudogene Chr12:73278786-73279091 (+)
BALB/cJ MGP_BALBcJ_G0010898
pseudogene Chr12:71612706-71613011 (+)
C3H/HeJ MGP_C3HHeJ_G0010793
pseudogene Chr12:73741004-73741309 (+)
C57BL/6NJ MGP_C57BL6NJ_G0011169
pseudogene Chr12:76183521-76183826 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0009781
pseudogene Chr12:68572823-68573116 (+)
CAST/EiJ MGP_CASTEiJ_G0010625
pseudogene Chr12:68527031-68527336 (+)
CBA/J MGP_CBAJ_G0010769
pseudogene Chr12:79125760-79126065 (+)
DBA/2J MGP_DBA2J_G0010815
pseudogene Chr12:71020437-71020742 (+)
FVB/NJ MGP_FVBNJ_G0010828
pseudogene Chr12:69863818-69864123 (+)
LP/J MGP_LPJ_G0010899
pseudogene Chr12:73918769-73919074 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0010809
pseudogene Chr12:82209625-82209930 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0011154
pseudogene Chr12:72773624-72773929 (+)
PWK/PhJ MGP_PWKPhJ_G0010515
pseudogene Chr12:65347596-65347896 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0010671
pseudogene Chr12:73369964-73370269 (+)



Homology
more
  • Human Ortholog
    S100A11, S100 calcium binding protein A11
  • Vertebrate Orthologs
    11
  • Human Ortholog
    S100A11, S100 calcium binding protein A11
    Orthology source: HomoloGene
  • Synonyms
    HEL-S-43, MLN70, S100C
  • Links
    NCBI Gene ID: 6282
    neXtProt AC: NX_P31949
    UniProt: P31949

  • Chr Location
    1q21.3; chr1:152032506-152037035 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 277089 NCBI Gene Model | MGI Sequence Detail 300 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory