S100a11-ps Pseudogene Detail

Summary

• Symbol
  S100a11-ps
• Name
  S100 calcium binding protein A11, pseudogene
• Synonyms
  Gm5068

• Feature Type
  pseudogene
• IDs
  MGI:3645720
  NCBI Gene: 277089
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:74007916-74008221 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 32.00 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645720	pseudogene	Chr12:74007861-74008351 (+)
129S1/SvImJ	ENSMUSG00200033101	pseudogene	Chr12:65935926-65936231 (+)
A/J	ENSMUSG00195014831	pseudogene	Chr12:68629349-68629654 (+)
AKR/J	ENSMUSG00220015595	pseudogene	Chr12:66429755-66430060 (+)
BALB/cJ	ENSMUSG00180036272	pseudogene	Chr12:67625026-67625331 (+)
C3H/HeJ	ENSMUSG00175029843	pseudogene	Chr12:70755079-70755384 (+)
C57BL/6NJ	ENSMUSG00215031422	pseudogene	Chr12:67000843-67001148 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009781	pseudogene	Chr12:68572823-68573116 (+)
CAST/EiJ	ENSTCUG00005037103	pseudogene	Chr12:66944132-66944437 (+)
CBA/J	ENSMUSG00210030922	pseudogene	Chr12:67192117-67192422 (+)
DBA/2J	ENSMUSG00185004983	pseudogene	Chr12:69090236-69090541 (+)
FVB/NJ	ENSMUSG00205035705	pseudogene	Chr12:66811181-66811486 (+)
JF1/MsJ	ENSUMUG00000024513	pseudogene	Chr12:73061897-73062197 (+)
LP/J	ENSMUSG00230022512	pseudogene	Chr12:76053851-76054156 (+)
NOD/ShiLtJ	ENSMUSG00190013161	pseudogene	Chr12:66241565-66241870 (+)
NZO/HlLtJ	ENSMUSG00225039073	pseudogene	Chr12:78108379-78108684 (+)
PWK/PhJ	ENSLUMG00010032030	pseudogene	Chr12:67117604-67117904 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005013010	pseudogene	Chr12:66887671-66887976 (+)

Homology

• Gene Tree
  S100a11-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving S100a11-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000066457 (Evidence)
• NCBI Gene
  277089

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000066457	Ensembl Gene Model | MGI Sequence Detail	306	C57BL/6J
transcript	ENSMUST00000181735	Ensembl | MGI Sequence Detail	306	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for S100a11-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr113875	Chr12:74007856-74007862 (+)	-57 bp