About   Help   FAQ
Lce3a Gene Detail
Summary
  • Symbol
    Lce3a
  • Name
    late cornified envelope 3A
  • Synonyms
    EG545548
  • Feature Type
    protein coding gene
  • IDs
    MGI:3645650
    NCBI Gene: 545548
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92925287-92926230 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    34 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645650
protein coding gene Chr3:92925287-92926230 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027522
protein coding gene Chr3:93396597-93398456 (-)
A/J MGP_AJ_G0027489
protein coding gene Chr3:90452288-90453952 (-)
AKR/J MGP_AKRJ_G0027454
protein coding gene Chr3:92574421-92576367 (-)
BALB/cJ MGP_BALBcJ_G0027497
protein coding gene Chr3:90263430-90264715 (-)
C3H/HeJ MGP_C3HHeJ_G0027235
protein coding gene Chr3:92792280-92794601 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027939
protein coding gene Chr3:96943346-96944289 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025288
protein coding gene Chr3:87074406-87075383 (-)
CAST/EiJ MGP_CASTEiJ_G0026683
protein coding gene Chr3:92218921-92219869 (-)
CBA/J MGP_CBAJ_G0027211
protein coding gene Chr3:100266010-100266953 (-)
DBA/2J MGP_DBA2J_G0027348
protein coding gene Chr3:89782068-89783011 (-)
FVB/NJ MGP_FVBNJ_G0027316
protein coding gene Chr3:87940228-87941171 (-)
LP/J MGP_LPJ_G0027456
protein coding gene Chr3:94609311-94610571 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027342
protein coding gene Chr3:106563012-106563955 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027999
protein coding gene Chr3:92315170-92318382 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0026765
protein coding gene Chr3:92677920-92679355 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 545548 NCBI Gene Model | MGI Sequence Detail 944 C57BL/6J ±  kb
transcript NM_001039594 RefSeq | MGI Sequence Detail 623 Not Specified  
polypeptide NP_001034683 RefSeq | MGI Sequence Detail 98 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR028205 Late cornified envelope protein
    IPR026075 Small proline-rich protein/late cornified envelope protein
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 3
References
more
  • Summaries
    All 20
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:218061 Krishnaswami SR, et al., Fate and Plasticity of the Epidermis in Response to Congenital Activation of BRAF. J Invest Dermatol. 2015 Feb;135(2):481-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/11/2019
MGI 6.14
The Jackson Laboratory