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Gm9396 Pseudogene Detail
Summary
  • Symbol
    Gm9396
  • Name
    predicted gene 9396
  • Feature Type
    pseudogene
  • IDs
    MGI:3645563
    NCBI Gene: 668844
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:130068412-130068978 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 59.92 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645563
pseudogene Chr3:130068393-130069021 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014698
pseudogene ChrX:101691731-101692249 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0014632
pseudogene ChrX:104706249-104707835 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0014484
pseudogene ChrX:102148657-102149175 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0014476
pseudogene ChrX:107922453-107925304 (+)
DBA/2J MGP_DBA2J_G0014559
pseudogene ChrX:100808043-100808561 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0014656
pseudogene ChrX:102653318-102654292 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0014586
pseudogene ChrX:112588312-112588830 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015106
pseudogene ChrX:101358616-101359134 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm9396
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063328 Ensembl Gene Model | MGI Sequence Detail 567 C57BL/6J ±  kb
transcript ENSMUST00000076703 Ensembl | MGI Sequence Detail 567 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 9
    Diseases 1
    Phenotypes 3
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/20/2020
MGI 6.16
The Jackson Laboratory