Gm16391 Pseudogene Detail

Summary

• Symbol
  Gm16391
• Name
  predicted pseudogene 16391

• Feature Type
  pseudogene
• IDs
  MGI:3645390
  NCBI Gene: 100043886
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:76591410-76591856 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 47.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645390	pseudogene	Chr17:76591184-76591934 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011395	pseudogene	Chr17:79004615-79005061 (-)
A/J	MGP_AJ_G0011385	pseudogene	Chr17:76577973-76578419 (-)
AKR/J	MGP_AKRJ_G0011351	pseudogene	Chr17:77727575-77728021 (-)
BALB/cJ	MGP_BALBcJ_G0011367	pseudogene	Chr17:76471655-76472101 (-)
C3H/HeJ	MGP_C3HHeJ_G0011252	pseudogene	Chr17:78623385-78623831 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011662	pseudogene	Chr17:81846654-81847100 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011009	pseudogene	Chr3:102768337-102768783 (+)
CAST/EiJ	MGP_CASTEiJ_G0011066	pseudogene	Chr17:79166101-79166484 (-)
CBA/J	MGP_CBAJ_G0011232	pseudogene	Chr17:85309260-85309706 (-)
DBA/2J	MGP_DBA2J_G0011284	pseudogene	Chr17:75142587-75143033 (-)
FVB/NJ	MGP_FVBNJ_G0011287	pseudogene	Chr17:74665551-74665997 (-)
LP/J	MGP_LPJ_G0011356	pseudogene	Chr17:79838986-79839432 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011280	pseudogene	Chr17:85092592-85094345 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011643	pseudogene	Chr17:78155279-78155725 (-)
PWK/PhJ	MGP_PWKPhJ_G0010932	pseudogene	Chr17:74554092-74554538 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010575	pseudogene	Chr15:77962352-77962798 (-)
WSB/EiJ	MGP_WSBEiJ_G0011101	pseudogene	Chr17:79024039-79024485 (-)

Homology

• Gene Tree
  Gm16391
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000066958 (Evidence)
• NCBI Gene
  100043886

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000066958	Ensembl Gene Model | MGI Sequence Detail	447	C57BL/6J
transcript	ENSMUST00000086601	Ensembl | MGI Sequence Detail	447	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;