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Gm4961 Gene Detail
Summary
  • Symbol
    Gm4961
  • Name
    predicted pseudogene 4961
Location &
Maps
more
  • Sequence Map
    Chr5:30297938-30302684 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    45 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645260
 lncRNA gene Chr5:30297938-30302684 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006604
 lincRNA gene Chr5:28064825-28068218 (+)
A/J MGP_AJ_G0006597
 lincRNA gene Chr5:27136933-27142169 (+)
AKR/J MGP_AKRJ_G0006567
 lincRNA gene Chr5:28221698-28226685 (+)
BALB/cJ MGP_BALBcJ_G0006572
 lincRNA gene Chr5:27666315-27671791 (+)
C3H/HeJ MGP_C3HHeJ_G0006519
 lincRNA gene Chr5:28251599-28257050 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006736
 lincRNA gene Chr5:29788232-29792621 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006004
 lincRNA gene Chr5:24660764-24663076 (+)
CAST/EiJ MGP_CASTEiJ_G0005376
 lincRNA gene Chr14:11615828-11621279 (-)
CBA/J MGP_CBAJ_G0006500
 lincRNA gene Chr5:30333785-30340111 (+)
DBA/2J MGP_DBA2J_G0006522
 lincRNA gene Chr5:27334150-27338119 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0006604
 lincRNA gene Chr5:28513180-28522165 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006528
 lincRNA gene Chr5:31293614-31298860 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006742
 lincRNA gene Chr5:27785211-27790181 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Radiation induced
    2
  • Spontaneous
    1
  • Genomic Mutations
    5 involving Gm4961
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 242914 NCBI Gene Model | MGI Sequence Detail 4747 C57BL/6J ±  kb
transcript NR_045694 RefSeq | MGI Sequence Detail 2249 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Diseases 1
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:100332 Wilson L, et al., Random mutagenesis of proximal mouse chromosome 5 uncovers predominantly embryonic lethal mutations. Genome Res. 2005 Aug;15(8):1095-105
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory