Gm9436 Pseudogene Detail

Summary

• Symbol
  Gm9436
• Name
  predicted gene 9436

• Feature Type
  pseudogene
• IDs
  MGI:3645165
  NCBI Gene: 668994
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:17540669-17542523 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 12.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645165	pseudogene	ChrX:17540575-17542595 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014331	pseudogene	ChrX:12545313-12547167 (-)
A/J	MGP_AJ_G0014339	pseudogene	ChrX:12646513-12648367 (-)
AKR/J	MGP_AKRJ_G0014266	pseudogene	ChrX:13016576-13018430 (-)
BALB/cJ	MGP_BALBcJ_G0014289	pseudogene	ChrX:12431807-12433661 (-)
C3H/HeJ	MGP_C3HHeJ_G0014124	pseudogene	ChrX:12655882-12657736 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014750	pseudogene	ChrX:12855703-12857557 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012543	pseudogene	ChrX:11118745-11120533 (-)
CAST/EiJ	MGP_CASTEiJ_G0013767	pseudogene	ChrX:12201835-12203689 (-)
CBA/J	MGP_CBAJ_G0014110	pseudogene	ChrX:13437786-13439640 (-)
DBA/2J	MGP_DBA2J_G0014188	pseudogene	ChrX:12451095-12452949 (-)
FVB/NJ	MGP_FVBNJ_G0014187	pseudogene	ChrX:12349194-12351048 (-)
LP/J	MGP_LPJ_G0014282	pseudogene	ChrX:12869373-12871227 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014224	pseudogene	ChrX:13580427-13582281 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014720	pseudogene	ChrX:12454484-12456338 (-)
PWK/PhJ	MGP_PWKPhJ_G0013581	pseudogene	ChrX:11774493-11776214 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013370	pseudogene	ChrX:12504418-12506165 (-)
WSB/EiJ	MGP_WSBEiJ_G0013831	pseudogene	ChrX:12419763-12421617 (-)

Homology

• Gene Tree
  Gm9436
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000081614 (Evidence)
• NCBI Gene
  668994

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081614	Ensembl Gene Model | MGI Sequence Detail	1855	C57BL/6J
transcript	ENSMUST00000120949	Ensembl | MGI Sequence Detail	1855	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;