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Gm5483
Gene Detail
Symbol

Name
ID
Gm5483
predicted gene 5483
MGI:3645124
Feature Type
protein coding gene
Genetic Map
Chromosome 16
25.43 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr16:36184212-36188111 bp, + strand
From NCBI annotation of GRCm38

  3900 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3819  Vertebrate Homology Class
1 human; 3 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

HCOP human homology predictions: CSTA
Gene Tree: Gm5483

Human
homologs
CSTA, cystatin A (stefin A)
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 1475
neXtProt AC: NX_P01040

Human Synonyms: AREI, STF1, STFA

Human Chr (Location): 3q21; chr3:122325164-122341969 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human CSTA

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Gm5483 interacts with 12 markers (Mir137, Mir148a, Mir148b, ...)
Expression
cDNA source data(3)
Other mouse links: GEO   Expression Atlas
Molecular
reagents
All nucleic(3) cDNA(3)
Other database
links
Ensembl Gene Model ENSMUSG00000079597 (Evidence)
Entrez Gene 433016 (Evidence)
UniGene 235340
DoTS DT.101322376, DT.97407809
Consensus CDS Project CCDS37328.1
International Mouse Phenotyping Consortium Status Gm5483
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 433016 NCBI Gene Model | MGI Sequence Detail 3900 C57BL/6J ±  kb
transcript NM_001082547 RefSeq | MGI Sequence Detail 414 C57BL/6 
polypeptide NP_001076016 RefSeq | MGI Sequence Detail 97 C57BL/6 

For the selected sequences
All sequences(13) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(79 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001713 Proteinase inhibitor I25A, stefin A
InterPro IPR000010 Proteinase inhibitor I25, cystatin
InterPro IPR018073 Proteinase inhibitor I25, cystatin, conserved site
References
(Earliest) J:23000 MGD Nomenclature Committee, 2/14/1995;
(Latest) J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;
All references(9)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory