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Nhsl2 Gene Detail
Summary
  • Symbol
    Nhsl2
  • Name
    NHS-like 2
  • Synonyms
    1110062M06Rik, Gm10456
  • Feature Type
    protein coding gene
  • IDs
    MGI:3645090
    NCBI Gene: 100042480
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:101849385-102092055 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 44.75 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    562 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645090
protein coding gene ChrX:101848669-102092055 (.)
129S1/SvImJ MGP_129S1SvImJ_G0035967
protein coding gene ChrX:98402326-98658783 (+)
A/J MGP_AJ_G0035952
protein coding gene ChrX:98377186-98625235 (+)
AKR/J MGP_AKRJ_G0035868
protein coding gene ChrX:101221355-101475561 (+)
BALB/cJ MGP_BALBcJ_G0035935
protein coding gene ChrX:97123411-97365412 (+)
C3H/HeJ MGP_C3HHeJ_G0035644
protein coding gene ChrX:98796389-99046598 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036465
protein coding gene ChrX:101320401-101569505 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033294
protein coding gene ChrX:96095115-96339333 (+)
CAST/EiJ MGP_CASTEiJ_G0034931
protein coding gene ChrX:83093997-83350289 (+)
CBA/J MGP_CBAJ_G0035619
protein coding gene ChrX:104471181-104734426 (+)
DBA/2J MGP_DBA2J_G0035773
protein coding gene ChrX:97596266-97841627 (+)
FVB/NJ MGP_FVBNJ_G0035712
protein coding gene ChrX:96966934-97210774 (+)
LP/J MGP_LPJ_G0035864
protein coding gene ChrX:99337527-99588266 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035746
protein coding gene ChrX:108996863-109264706 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036491
protein coding gene ChrX:98070413-98316548 (+)
PWK/PhJ MGP_PWKPhJ_G0034630
protein coding gene ChrX:80691437-80935374 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034458
protein coding gene ChrX:84016996-84262354 (+)
WSB/EiJ MGP_WSBEiJ_G0035070
protein coding gene ChrX:96770081-97021502 (+)



Homology
more
  • Human Ortholog
    NHSL2, NHS like 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    NHSL2, NHS like 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 340527
    UniProt: Q5HYW2

  • Chr Location
    Xq13.1; chrX:71911073-72153286 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 19759
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: NHSL2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079481 Ensembl Gene Model | MGI Sequence Detail 242671 C57BL/6J ±  kb
transcript ENSMUST00000101339 Ensembl | MGI Sequence Detail 12971 Not Applicable  
polypeptide ENSMUSP00000098893 Ensembl | MGI Sequence Detail 1219 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR024845 Nance-Horan syndrome protein family
Molecular
Reagents
less
  • All nucleic 35
    cDNA 35

    Microarray probesets 3
Other
Accession IDs
less
MGI:1916100, MGI:2147854, MGI:2148011, MGI:3642348
References
more
  • Summaries
    All 25
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory