Gm16383 Pseudogene Detail

Summary

• Symbol
  Gm16383
• Name
  predicted gene 16383

• Feature Type
  pseudogene
• IDs
  MGI:3645004
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:39090094-39090764 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 23.19 cM
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645004	pseudogene	ChrX:39090094-39090764 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014377	pseudogene	ChrX:35006072-35006742 (+)
A/J	MGP_AJ_G0014384	pseudogene	ChrX:35030875-35031545 (+)
AKR/J	MGP_AKRJ_G0014311	pseudogene	ChrX:35890650-35891320 (+)
BALB/cJ	MGP_BALBcJ_G0014336	pseudogene	ChrX:34741170-34741840 (+)
C3H/HeJ	MGP_C3HHeJ_G0014170	pseudogene	ChrX:35382798-35383468 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014794	pseudogene	ChrX:35808508-35809178 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012583	pseudogene	ChrX:33307578-33308254 (+)
CAST/EiJ	MGP_CASTEiJ_G0013811	pseudogene	ChrX:23292743-23293419 (+)
CBA/J	MGP_CBAJ_G0014154	pseudogene	ChrX:36718760-36719430 (+)
DBA/2J	MGP_DBA2J_G0014232	pseudogene	ChrX:34871190-34871860 (+)
FVB/NJ	MGP_FVBNJ_G0014233	pseudogene	ChrX:34596768-34597438 (+)
LP/J	MGP_LPJ_G0014329	pseudogene	ChrX:35368082-35368752 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014268	pseudogene	ChrX:37138760-37139430 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014768	pseudogene	ChrX:35020377-35021047 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0013421	pseudogene	ChrX:23769552-23771092 (+)
WSB/EiJ	MGP_WSBEiJ_G0013876	pseudogene	ChrX:34672786-34673456 (+)

Homology

• Gene Tree
  Gm16383
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000080903 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080903	Ensembl Gene Model | MGI Sequence Detail	671	C57BL/6J
transcript	ENSMUST00000118122	Ensembl | MGI Sequence Detail	232	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;