Rpl31-ps1 Pseudogene Detail

Summary

• Symbol
  Rpl31-ps1
• Name
  ribosomal protein L31, pseudogene 1
• Synonyms
  Gm5437

• Feature Type
  pseudogene
• IDs
  MGI:3644997
  NCBI Gene: 432681
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:91857670-91858047 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 45.02 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  47 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644997	pseudogene	Chr12:91857619-91858108 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010932	pseudogene	Chr12:93025804-93026181 (-)
A/J	MGP_AJ_G0010939	pseudogene	Chr12:89530275-89530769 (-)
AKR/J	MGP_AKRJ_G0010895	pseudogene	Chr12:91937024-91937401 (-)
BALB/cJ	MGP_BALBcJ_G0010913	pseudogene	Chr12:89817042-89817419 (-)
C3H/HeJ	MGP_C3HHeJ_G0010810	pseudogene	Chr12:92544137-92544514 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011185	pseudogene	Chr12:95766220-95766597 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010570	pseudogene	Chr2:99087676-99088053 (-)
CAST/EiJ	MGP_CASTEiJ_G0010642	pseudogene	Chr12:87479211-87479569 (-)
CBA/J	MGP_CBAJ_G0010783	pseudogene	Chr12:99351972-99352349 (-)
DBA/2J	MGP_DBA2J_G0010832	pseudogene	Chr12:89004749-89005126 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0010915	pseudogene	Chr12:92821429-92822287 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0011169	pseudogene	Chr12:91546642-91547019 (-)
PWK/PhJ	MGP_PWKPhJ_G0010528	pseudogene	Chr12:83600196-83600573 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010344	pseudogene	Chr12:85704517-85704894 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rpl31-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Rpl31-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000066389 (Evidence)
• NCBI Gene
  432681

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000066389	Ensembl Gene Model | MGI Sequence Detail	378	C57BL/6J
transcript	ENSMUST00000085128	Ensembl | MGI Sequence Detail	378	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;