Gm7967 Gene Detail

Summary

• Symbol
  Gm7967
• Name
  predicted gene 7967

• Feature Type
  lncRNA gene
• IDs
  MGI:3644984
  NCBI Gene: 666182
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:98517242-98535109 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  169 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644984	lncRNA gene	Chr1:98517242-98535115 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004929	lincRNA gene	Chr1:100377044-100395331 (+)
A/J	MGP_AJ_G0004911	lincRNA gene	Chr1:96864612-96953054 (+)
AKR/J	MGP_AKRJ_G0004889	lincRNA gene	Chr1:99679720-99700876 (+)
BALB/cJ	MGP_BALBcJ_G0004892	lincRNA gene	Chr1:97021143-97034878 (+)
C3H/HeJ	MGP_C3HHeJ_G0004841	lincRNA gene	Chr1:99955190-99976475 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005042	lincRNA gene	Chr1:104346562-104370031 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0004833	lincRNA gene	Chr1:107764838-107780221 (+)
DBA/2J	MGP_DBA2J_G0004852	lincRNA gene	Chr1:96078216-96090111 (+)
FVB/NJ	MGP_FVBNJ_G0004871	lincRNA gene	Chr1:95063611-95077514 (+)
LP/J	MGP_LPJ_G0004930	lincRNA gene	Chr1:101662741-101687435 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004856	lincRNA gene	Chr1:111531317-111548488 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005047	lincRNA gene	Chr1:99701085-99713890 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0004837	lincRNA gene	Chr1:99528799-99551741 (+)

Homology

• Gene Tree
  Gm7967
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Endonuclease-mediated
  2
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm7967
• Find Mice (IMSR)
  2 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  5

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000100009 (Evidence)
• NCBI Gene
  666182

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100009	Ensembl Gene Model | MGI Sequence Detail	17868	C57BL/6J
transcript	ENSMUST00000191042	Ensembl | MGI Sequence Detail	5042	Not Applicable

Molecular
Reagents

• All nucleic 5

  cDNA 5

References

• Summaries
  All 13

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582