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H2afb3 Gene Detail
Summary
  • Symbol
    H2afb3
  • Name
    H2A histone family, member B3
  • Synonyms
    EG624957, H2A.Bbd3, H2afb3-ps
  • Feature Type
    protein coding gene
  • IDs
    MGI:3644875
    NCBI Gene: 624957
Location & Maps
more
  • Sequence Map
    ChrX:120312748-120313095 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      348 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 49.58 cM
  • Mapping Data
    1 experiment
Homology
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  • Human Ortholog
    H2AFB1, H2A histone family member B1
  • Vertebrate Orthologs
    12
  • Human Ortholog
    H2AFB1, H2A histone family member B1
    Orthology source: HomoloGene
  • Synonyms
    H2A.Bbd
  • Links
    NCBI Gene ID: 474382
    neXtProt AC: NX_P0C5Y9

  • Chr Location
    Xq28; chrX:154885042-154885558 (+)  GRCh38.p2

  • Human Ortholog
    H2AFB2, H2A histone family member B2
    Orthology source: HomoloGene
  • Synonyms
    H2A.Bbd
  • Links
    NCBI Gene ID: 474381
    neXtProt AC: NX_P0C5Z0

  • Chr Location
    Xq28; chrX:155380706-155381299 (+)  GRCh38.p2

  • Human Ortholog
    H2AFB3, H2A histone family member B3
    Orthology source: HomoloGene
  • Synonyms
    H2ABBD, H2AFB
  • Links
    NCBI Gene ID: 83740
    neXtProt AC: NX_P0C5Z0

  • Chr Location
    Xq28; chrX:155459419-155459935 (-)  GRCh38.p2

Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018509 VEGA Gene Model | MGI Sequence Detail 348 C57BL/6J ±  kb
transcript OTTMUST00000044625 VEGA | MGI Sequence Detail 348 Not Applicable  
polypeptide OTTMUSP00000065265 VEGA | MGI Sequence Detail 115 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    16 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 11
    Gene Ontology 2
  • Earliest
    J:173007 Ishibashi T, et al., H2A.Bbd: an X-chromosome-encoded histone involved in mammalian spermiogenesis. Nucleic Acids Res. 2010 Apr;38(6):1780-9
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory