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Semp2l1 Gene Detail
Summary
  • Symbol
    Semp2l1
  • Name
    SUMO/sentrin specific peptidase 2-like 1
  • Synonyms
    Gm5415
  • Feature Type
    protein coding gene
  • IDs
    MGI:3644687
    NCBI Gene: 408191
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:32582767-32586375 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 12.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644687
 protein coding gene Chr1:32582627-32586375 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0022683
 protein coding gene Chr16:28006252-28008597 (-)
AKR/J MGP_AKRJ_G0015839
 protein coding gene Chr1:30416863-30436355 (-)
BALB/cJ MGP_BALBcJ_G0015838
 protein coding gene Chr1:29765055-29767447 (-)
C3H/HeJ MGP_C3HHeJ_G0015672
 protein coding gene Chr1:30646051-30650260 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034493
 protein coding gene Chr8:106211316-106214824 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014013
 protein coding gene Chr1:27771416-27774722 (+)
CAST/EiJ MGP_CASTEiJ_G0015251
 protein coding gene Chr1:30542136-30544214 (-)
CBA/J MGP_CBAJ_G0029188
 protein coding gene Chr5:44743381-44756157 (-)
DBA/2J MGP_DBA2J_G0015744
 protein coding gene Chr1:29465721-29491948 (-)
FVB/NJ MGP_FVBNJ_G0029294
 protein coding gene Chr5:39671749-39675925 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0033191
 protein coding gene Chr8:12312406-12315901 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0014815
 protein coding gene Chr1:30418121-30420072 (-)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091318 Ensembl Gene Model | MGI Sequence Detail 3609 C57BL/6J ±  kb
transcript ENSMUST00000171322 Ensembl | MGI Sequence Detail 3609 Not Applicable  
polypeptide ENSMUSP00000132789 Ensembl | MGI Sequence Detail 478 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR038765 Papain-like cysteine peptidase superfamily
    IPR003653 Ulp1 protease family, C-terminal catalytic domain
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 11
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory