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Gm5334 Pseudogene Detail
Summary
  • Symbol
    Gm5334
  • Name
    predicted pseudogene 5334
  • Feature Type
    pseudogene
  • IDs
    MGI:3644545
    NCBI Gene: 384639
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:68618838-68619557 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 37.73 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644545
pseudogene Chr7:68618456-68620009 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039748
pseudogene Chr7:69948684-69950237 (+)
A/J MGP_AJ_G0039748
pseudogene Chr7:68477968-68479521 (+)
AKR/J MGP_AKRJ_G0039672
pseudogene Chr7:69926245-69927798 (+)
BALB/cJ MGP_BALBcJ_G0039716
pseudogene Chr7:68220793-68222346 (+)
C3H/HeJ MGP_C3HHeJ_G0039378
pseudogene Chr7:70641028-70642581 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040279
pseudogene Chr7:72885815-72887368 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036906
pseudogene Chr7:71320743-71322286 (+)
CAST/EiJ MGP_CASTEiJ_G0038496
pseudogene Chr7:61334788-61336341 (+)
CBA/J MGP_CBAJ_G0039350
pseudogene Chr7:75183725-75185278 (+)
DBA/2J MGP_DBA2J_G0039544
pseudogene Chr7:67186470-67188023 (+)
FVB/NJ MGP_FVBNJ_G0039502
pseudogene Chr7:67316249-67317802 (+)
LP/J MGP_LPJ_G0039583
pseudogene Chr7:71162265-71163818 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039503
pseudogene Chr7:75371387-75372940 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040381
pseudogene Chr7:69324351-69325904 (+)
PWK/PhJ MGP_PWKPhJ_G0038172
pseudogene Chr7:60254011-60255564 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037919
pseudogene Chr7:56350415-56351968 (+)
WSB/EiJ MGP_WSBEiJ_G0038731
pseudogene Chr7:69650154-69651707 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5334
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000094854 Ensembl Gene Model | MGI Sequence Detail 720 C57BL/6J ±  kb
transcript ENSMUST00000187472 Ensembl | MGI Sequence Detail 720 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 9
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory