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Trav3-1 Gene Detail
Summary
  • Symbol
    Trav3-1
  • Name
    T cell receptor alpha variable 3-1
  • Feature Type
    gene segment
  • IDs
    MGI:3644489
    NCBI Gene: 667441
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr14:52580762-52581213 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    22 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644489
gene segment Chr14:52580665-52581213 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002519
gene segment Chr14:46649679-46650227 (+)
A/J MGP_AJ_G0002491
gene segment Chr14:45424906-45425454 (+)
AKR/J MGP_AKRJ_G0002478
gene segment Chr14:47076139-47076687 (+)
BALB/cJ MGP_BALBcJ_G0002487
gene segment Chr14:45534424-45534972 (+)
C3H/HeJ MGP_C3HHeJ_G0002463
gene segment Chr14:46844109-46844657 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002612
gene segment Chr14:48707760-48708308 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002217
gene segment Chr14:44554644-44555187 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0002454
gene segment Chr14:50198633-50199181 (+)
DBA/2J MGP_DBA2J_G0002460
gene segment Chr14:45195622-45196779 (+)
FVB/NJ MGP_FVBNJ_G0002474
gene segment Chr14:44761414-44761962 (+)
LP/J MGP_LPJ_G0002515
gene segment Chr14:47253802-47262046 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002444
gene segment Chr14:49628701-49629249 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002608
gene segment Chr14:46418207-46418755 (+)
PWK/PhJ MGP_PWKPhJ_G0002402
gene segment Chr14:41948903-41949451 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002338
gene segment Chr14:42462123-42462666 (+)
WSB/EiJ no annotation



Homology
less
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 667441 NCBI Gene Model | MGI Sequence Detail 452 C57BL/6J ±  kb
polypeptide Q5R1I8 UniProt | EBI | MGI Sequence Detail 114 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory