Gm9081 Pseudogene Detail

Summary

• Symbol
  Gm9081
• Name
  predicted gene 9081

• Feature Type
  pseudogene
• IDs
  MGI:3644454
  NCBI Gene: 668275
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:122005278-122006268 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 70.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  56 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644454	pseudogene	Chr10:122005260-122006478 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010550	pseudogene	Chr10:125482626-125483586 (+)
A/J	MGP_AJ_G0010544	pseudogene	Chr10:120462771-120466946 (+)
AKR/J	MGP_AKRJ_G0010504	pseudogene	Chr10:124060998-124061988 (+)
BALB/cJ	MGP_BALBcJ_G0010518	pseudogene	Chr10:120888539-120889529 (+)
C3H/HeJ	MGP_C3HHeJ_G0010442	pseudogene	Chr10:124257152-124259198 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010785	pseudogene	Chr10:129728278-129731421 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0010413	pseudogene	Chr10:135007390-135008380 (+)
DBA/2J	MGP_DBA2J_G0010442	pseudogene	Chr10:119610131-119611121 (+)
FVB/NJ	MGP_FVBNJ_G0010460	pseudogene	Chr10:118592174-118593388 (+)
LP/J	MGP_LPJ_G0010532	pseudogene	Chr10:126015277-126016267 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010437	pseudogene	Chr10:137550402-137551388 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010765	pseudogene	Chr10:124122349-124123659 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9081
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000098138 (Evidence)
• NCBI Gene
  668275

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098138	Ensembl Gene Model | MGI Sequence Detail	991	C57BL/6J
transcript	ENSMUST00000182346	Ensembl | MGI Sequence Detail	991	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;