Gm7105 Pseudogene Detail

Summary

• Symbol
  Gm7105
• Name
  predicted gene 7105

• Feature Type
  pseudogene
• IDs
  MGI:3644446
  NCBI Gene: 633120
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:8233588-8234951 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 5.41 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644446	pseudogene	Chr19:8233302-8235026 (-)
129S1/SvImJ	ENSMUSG00200052681	pseudogene	Chr19:4959200-4960563 (-)
A/J	ENSMUSG00195053696	pseudogene	Chr19:5360727-5362090 (-)
AKR/J	ENSMUSG00220050995	pseudogene	Chr19:5133972-5135335 (-)
BALB/cJ	ENSMUSG00180051880	pseudogene	Chr19:5724681-5726044 (-)
C3H/HeJ	ENSMUSG00175015321	pseudogene	Chr19:4998488-4999851 (-)
C57BL/6NJ	ENSMUSG00215047800	pseudogene	Chr19:5199644-5201007 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210050601	pseudogene	Chr19:4985838-4987196 (-)
DBA/2J	ENSMUSG00185052973	pseudogene	Chr19:5355995-5357353 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000056999	pseudogene	Chr19:5567258-5568621 (-)
JF1/MsJ	ENSUMUG00000056561	pseudogene	Chr19:5292498-5293861 (-)
LP/J	ENSMUSG00230054366	pseudogene	Chr19:6285886-6287249 (-)
NOD/ShiLtJ	ENSMUSG00190053148	pseudogene	Chr19:4894315-4895678 (-)
NZO/HlLtJ	ENSMUSG00225026998	pseudogene	Chr19:9994698-9996061 (-)
PWK/PhJ	ENSLUMG00010008734	pseudogene	Chr19:5035912-5037275 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005051348	pseudogene	Chr19:4734335-4735693 (-)

Homology

• Gene Tree
  Gm7105
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  2

• Ensembl
  ENSMUSG00000118345 (Evidence)
• NCBI Gene
  633120

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118345	Ensembl Gene Model | MGI Sequence Detail	1364	C57BL/6J
transcript	ENSMUST00000236033	Ensembl | MGI Sequence Detail	1364	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm7105:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr158011	Chr19:8235010-8235013 (-)	-61 bp